RNA–Protein interactions for RNA: ENST00000563909.5

RNF40-205, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-205ENST00000563909 TO15178 435 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SS18L1O75177 396 aaPredicted RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 VENTXO95231 258 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 CPSF4O95639 269 aaKnown RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 HK1P19367 917 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 CCT3P49368 545 aaKnown RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 CDH11P55287 796 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SPDYE7PQ495Y7 208 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 FIGNL1Q6PIW4 674 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 PIGWQ7Z7B1 504 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 ANKRD46Q86W74 232 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 FUNDC1Q8IVP5 155 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 NUP43Q8NFH3 380 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 OR56A1Q8NGH5 318 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SFXN5Q8TD22 340 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 C3orf49Q96BT1 292 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SPDL1Q96EA4 605 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SLC35A4Q96G79 324 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 CCT8L2Q96SF2 557 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 PRR14Q9BWN1 585 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 C12orf49Q9H741 205 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 CXorf36Q9H7Y0 433 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 SIRT3Q9NTG7 399 aaPredicted RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 ZCCHC3Q9NUD5 404 aaKnown RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 GPR55Q9Y2T6 319 aaPredicted RBP14.1□□□□□ -0.15
RNF40-205ENST00000563909 VWFP04275 2813 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 CADP27708 2225 aa14.1□□□□□ -0.15
RNF40-205ENST00000563909 NR5A2O00482 541 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 PSMG1O95456 288 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 APEHP13798 732 aaKnown RBP14.09□□□□□ -0.15
RNF40-205ENST00000563909 UQCRC2P22695 453 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 IL32P24001 234 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 SOAT1P35610 550 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 PRKAG1P54619 331 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 ZNHIT3Q15649 155 aaPredicted RBP14.09□□□□□ -0.15
RNF40-205ENST00000563909 CPEB4Q17RY0 729 aaKnown RBP eCLIP14.09□□□□□ -0.15
RNF40-205ENST00000563909 TIGD2Q4W5G0 525 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 PRR31Q5SQ13 230 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 ZCCHC12Q6PEW1 402 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 SZRD1Q7Z422 152 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 METTL25Q8N6Q8 603 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 TRIML2Q8N7C3 387 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 TSPEARQ8WU66 669 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 ZFAND2BQ8WV99 257 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 GCDHQ92947 438 aaPredicted RBP14.09□□□□□ -0.15
RNF40-205ENST00000563909 VPS33AQ96AX1 596 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 FAM120BQ96EK7 910 aaKnown RBP14.09□□□□□ -0.15
RNF40-205ENST00000563909 ITCHQ96J02 903 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 MS4A4EQ96PG1 132 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 PANX1Q96RD7 426 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 DSN1Q9H410 356 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 OCEL1Q9H607 264 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 SAR1AQ9NR31 198 aa14.09□□□□□ -0.15
RNF40-205ENST00000563909 OR2M5A3KFT3 312 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 LINC01387J3KSC0 135 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 RFXANKO14593 260 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 SLC22A2O15244 555 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 TSPAN2O60636 221 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 FAM107AO95990 144 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 CSF3P09919 207 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 IL12BP29460 328 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 KRT20P35900 424 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 EIF1AXP47813 144 aaKnown RBP14.08□□□□□ -0.16
RNF40-205ENST00000563909 PRIM2P49643 509 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 PSPHP78330 225 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 ZNF155Q12901 538 aaPredicted RBP14.08□□□□□ -0.16
RNF40-205ENST00000563909 EFR3AQ14156 821 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 MAPRE2Q15555 327 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 C11orf71Q6IPW1 123 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 CDRT4Q8N9R6 151 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 VSTM2LQ96N03 204 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 CBLN4Q9NTU7 201 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 FBXO34Q9NWN3 711 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 ARL2BPQ9Y2Y0 163 aa14.08□□□□□ -0.16
RNF40-205ENST00000563909 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 GCM2O75603 506 aaPredicted RBP14.07□□□□□ -0.16
RNF40-205ENST00000563909 ANP32DO95626 131 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 KRT16P08779 473 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 CT45A8P0DMV1 189 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 CT45A9P0DMV2 189 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 TTKP33981 857 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 GAS1P54826 345 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 CORO7P57737 925 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 KLF10Q13118 480 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 TP53BP2Q13625 1128 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 VPS26BQ4G0F5 336 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 CT45A2Q5DJT8 189 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 SFRP5Q5T4F7 317 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 GKAP1Q5VSY0 366 aaPredicted RBP14.07□□□□□ -0.16
RNF40-205ENST00000563909 HIST2H2BDQ6DRA6 164 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 SEZ6L2Q6UXD5 910 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 ZNF621Q6ZSS3 439 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 MTERF4Q7Z6M4 381 aaKnown RBP14.07□□□□□ -0.16
RNF40-205ENST00000563909 GIMAP5Q96F15 307 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 BTBD9Q96Q07 612 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 INPP5KQ9BT40 448 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 LMF2Q9BU23 707 aaKnown RBP14.07□□□□□ -0.16
RNF40-205ENST00000563909 NMUR2Q9GZQ4 415 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 SLC52A3Q9NQ40 469 aa14.07□□□□□ -0.16
RNF40-205ENST00000563909 EQTNQ9NQ60 294 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms