RNA–Protein interactions for RNA: ENST00000563149.1

USB1-207, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-207ENST00000563149 TBC1D3Q8IZP1 549 aaPredicted RBP12.08□□□□□ -0.48
USB1-207ENST00000563149 LSMEM1Q8N8F7 131 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 C17orf47Q8NEP4 570 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 BADQ92934 168 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 YIPF5Q969M3 257 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 RERGQ96A58 199 aaPredicted RBP12.08□□□□□ -0.48
USB1-207ENST00000563149 CTHRC1Q96CG8 243 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 FBXO34Q9NWN3 711 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 EMC3Q9P0I2 261 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 SPATA2Q9UM82 520 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 ICAM5Q9UMF0 924 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 SCML1Q9UN30 329 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 SNRNP200O75643 2136 aaKnown RBP12.08□□□□□ -0.48
USB1-207ENST00000563149 C2orf16Q68DN1 1984 aa12.08□□□□□ -0.48
USB1-207ENST00000563149 TRAV27A0A087WT01 109 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 TEX13CA0A0J9YWL9 993 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 A0A1B0GVI7 797 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 LRRN3E7EW58 273 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 FLRT2O43155 660 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ZNF749O43361 778 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 FGF17O60258 216 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 EML2O95834 649 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 UCHL1P09936 223 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 EPXP11678 715 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ANXA3P12429 323 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 PYCR1P32322 319 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 GABRA3P34903 492 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ACVR1BP36896 505 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 KIR2DL1P43626 348 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 OR3A3P47888 321 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SOX9P48436 509 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 P2RX3P56373 397 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SNRPNP63162 240 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 LGALS3BPQ08380 585 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 GPM6BQ13491 265 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 NFATC4Q14934 902 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 CDK5R1Q15078 307 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SLC25A35Q3KQZ1 300 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ITPRIPL2Q3MIP1 535 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 PRRT3Q5FWE3 981 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 RPL22L1Q6P5R6 122 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 FIGNL1Q6PIW4 674 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 LYPD4Q6UWN0 246 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ENPP7Q6UWV6 458 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 LINC00114Q6XXX2 140 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 LUZP2Q86TE4 346 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SLITRK4Q8IW52 837 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 OR51A7Q8NH64 312 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ZNF431Q8TF32 576 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 THAP4Q8WY91 577 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 OR1E3Q8WZA6 343 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SMIM19Q96E16 107 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 WDR92Q96MX6 357 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 TNFRSF13CQ96RJ3 184 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 OR51J1Q9H342 316 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 LRRN3Q9H3W5 708 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 KLHL1Q9NR64 748 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ACTR10Q9NZ32 417 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ENTPD2Q9Y5L3 495 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 NPIPA5A0A0B4J1W7 369 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 A0A1B0GWA3 101 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 FAM221BA6H8Z2 402 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 NPIPA7E9PJI5 369 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 AGRPO00253 132 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 CYR61O00622 381 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SLC31A1O15431 190 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 NARSO43776 548 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 NOS1APO75052 506 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 DNAJB6O75190 326 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 NPIPA8P0DM63 369 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 AK4P27144 223 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 MAT2AP31153 395 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 NUDT1P36639 197 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 GDI2P50395 445 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 ARPC4P59998 168 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 SNRPD2P62316 118 aaKnown RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 CDONQ4KMG0 1287 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 UNQ9370/PRO34162Q6UXP9 181 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 BTN2A1Q7KYR7 527 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ZNF550Q7Z398 422 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 FAM109AQ8N4B1 249 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 OR5J2Q8NH18 312 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 PHF21AQ96BD5 680 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 MED30Q96HR3 178 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 CACNG6Q9BXT2 260 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 PLA2G2FQ9BZM2 168 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 TMEM168Q9H0V1 697 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 MCCC2Q9HCC0 563 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 NUDT15Q9NV35 164 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 FLRT3Q9NZU0 649 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 AKAP7Q9P0M2 348 aaPredicted RBP12.07□□□□□ -0.48
USB1-207ENST00000563149 DOCK9Q9BZ29 2069 aa12.07□□□□□ -0.48
USB1-207ENST00000563149 GXYLT2A0PJZ3 443 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 A6NCN8 305 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 H0YGG7 62 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 SMLR1H3BR10 107 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 TNFRSF10CO14798 259 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 SCAMP1O15126 338 aa12.06□□□□□ -0.48
USB1-207ENST00000563149 GPRIN2O60269 458 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms