RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 RFLNBQ8N5W9 214 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 AVL9Q8NBF6 648 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ICA1LQ8NDH6 482 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 SETD9Q8NE22 299 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 OR13C4Q8NGS5 318 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 METTL6Q8TCB7 284 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 AGR3Q8TD06 166 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 TRPC4APQ8TEL6 797 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 WIPF2Q8TF74 440 aaPredicted RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 EEF1AKMT1Q8WVE0 214 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 TWIST2Q8WVJ9 160 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ANKRD49Q8WVL7 239 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 IGFBPL1Q8WX77 278 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 N4BP2L2Q92802 583 aaPredicted RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 RPL36ALQ969Q0 106 aaKnown RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 ATP6V1E2Q96A05 226 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ZUFSPQ96AP4 578 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 TUBGCP3Q96CW5 907 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 CXorf40BQ96DE9 158 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ASB9Q96DX5 294 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 RNF125Q96EQ8 232 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 LINGO1Q96FE5 620 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 DUS3LQ96G46 650 aaKnown RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 FOPNLQ96NB1 174 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 CDRT15Q96T59 188 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ZSCAN5AQ9BUG6 496 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 NTMT1Q9BV86 223 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 KLHL4Q9C0H6 718 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PAIP1Q9H074 479 aaKnown RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 DEFB127Q9H1M4 99 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 CXorf56Q9H5V9 222 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 ZNF385DQ9H6B1 395 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 YY1AP1Q9H869 796 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PARVBQ9HBI1 364 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PNPLA3Q9NST1 481 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 TUBA8Q9NY65 449 aaPredicted RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 ADA2Q9NZK5 511 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 NDUFA13Q9P0J0 144 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 NFKBIL1Q9UBC1 381 aaPredicted RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 OPTCQ9UBM4 332 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PTBP2Q9UKA9 531 aaKnown RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 SNX6Q9UNH7 406 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PSMD13Q9UNM6 376 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 POMPQ9Y244 141 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 OARD1Q9Y530 152 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 DNAJC15Q9Y5T4 150 aa2.9□□□□□ -1.95
SPG11-225ENST00000561391 PHF3Q92576 2039 aaKnown RBP2.9□□□□□ -1.95
SPG11-225ENST00000561391 RYR1P21817 5038 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 IGLV3-16A0A075B6K0 115 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 TMEM272A0A1B0GTI8 110 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 A0A1B0GVC2 190 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 MAGEA13PA6NCF6 341 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 OR6C74A6NCV1 312 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ASPDHA6ND91 283 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 OR51F1A6NGY5 319 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 C17orf100A8MU93 164 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 UBXN8O00124 270 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CDC7O00311 574 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CCL22O00626 93 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 MRASO14807 208 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 TFECO14948 347 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 CFLARO15519 480 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 BUD23O43709 281 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 HS6ST1O60243 411 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 KIAA0513O60268 411 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 DSCAMO60469 2012 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 KCNJ13O60928 360 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 EEDO75530 441 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 OR2B3O76000 313 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 KRT36O76013 467 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 MYO1DO94832 1006 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 NDUFB8O95169 186 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 BMP10O95393 424 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CLDN9O95484 217 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RPN2P04844 631 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 IL6P05231 212 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SERPINA7P05543 415 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 LCKP06239 509 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 GPIP06744 558 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CHRM4P08173 479 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RPS17P08708 135 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 RPSAP08865 295 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 PIRTP0C851 137 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 PRPS2P11908 318 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 HSD17B1P14061 328 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ATP1B2P14415 290 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 ZNF24P17028 368 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CTPS1P17812 591 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 POLR2CP19387 275 aaPredicted RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 GPX3P22352 226 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 JAK1P23458 1154 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 HMOX2P30519 316 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 ACVR1BP36896 505 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 RGRP47804 291 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 SPINT3P49223 89 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 HNRNPFP52597 415 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 CLNS1AP54105 237 aaKnown RBP2.89□□□□□ -1.95
SPG11-225ENST00000561391 CASP9P55211 416 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 CDH13P55290 713 aa2.89□□□□□ -1.95
SPG11-225ENST00000561391 VAMP2P63027 116 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms