RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 RGNQ15493 299 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ANKRD34AQ69YU3 496 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 C3orf33Q6P1S2 294 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF836Q6ZNA1 936 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF550Q7Z398 422 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 NUFIP2Q7Z417 695 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CDC20BQ86Y33 519 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 OR6K3Q8NGY3 331 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 OR52P1PQ8NH57 321 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF563Q8TA94 476 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM234Q8WY98 164 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CPNE4Q96A23 557 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM19Q96HH6 336 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 WFIKKN1Q96NZ8 548 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 RSPO3Q9BXY4 272 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 OR11A1Q9GZK7 315 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 IKZF5Q9H5V7 419 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF385DQ9H6B1 395 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 C12orf49Q9H741 205 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 EXOSC3Q9NQT5 275 aaKnown RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 PLSCR4Q9NRQ2 329 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 KLHL28Q9NXS3 571 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 VAPAQ9P0L0 249 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 ING1Q9UK53 422 aaPredicted RBP10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 CHST2Q9Y4C5 530 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 TESMINQ9Y4I5 508 aa10.39□□□□□ -0.75
RABGGTA-216ENST00000560243 TRBV5-3A0A0A0MS03 114 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 A0A1W2PPR1 153 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 CDHR4A6H8M9 788 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 SMAD9O15198 467 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 SIAH2O43255 324 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 DBIP07108 87 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 GKN3PP0CG01 181 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 POU2F1P14859 743 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 IL7RP16871 459 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 NCF2P19878 526 aaPredicted RBP10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 DNAJA1P31689 397 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 KCNJ5P48544 419 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 ATP4BP51164 291 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 SF3A3Q12874 501 aaKnown RBP eCLIP10.38□□□□□ -0.756e-11■■□□□ 13
RABGGTA-216ENST00000560243 SYT14P1Q58G82 188 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 LRIF1Q5T3J3 769 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 FCRLAQ7L513 359 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 ADGRG3Q86Y34 549 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 TUSC5Q8IXB3 177 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 CMIPQ8IY22 773 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 PEX5LQ8IYB4 626 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 CLIP4Q8N3C7 705 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 ARL5BQ96KC2 179 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 DACH2Q96NX9 599 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 KLHL4Q9C0H6 718 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 TIGARQ9NQ88 270 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 ELOVL5Q9NYP7 299 aa10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 PRRC2AP48634 2157 aaKnown RBP10.38□□□□□ -0.75
RABGGTA-216ENST00000560243 A0A0G2JND7 137 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 A0A1W2PP18 115 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 CFAP73A6NFT4 308 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 C16orf97H3BN30 126 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 PRKD3O94806 890 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 HRGP04196 525 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 FESP07332 822 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 TFPIP10646 304 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 BMP2P12643 396 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 PRG2P13727 222 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 EDNRAP25101 427 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 APOBEC1P41238 236 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 ACAA2P42765 397 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 DIO1P49895 249 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 CRISP3P54108 245 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 RAC3P60763 192 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 EPS8Q12929 822 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 DLEU7Q6UYE1 221 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 STAC2Q6ZMT1 411 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 TMPPEQ6ZT21 453 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 GRINAQ7Z429 371 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 STON2Q8WXE9 905 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 PMM1Q92871 262 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF775Q96BV0 537 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 ZC3HAV1LQ96H79 300 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 REXO5Q96IC2 774 aaKnown RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 SLC39A3Q9BRY0 314 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 A4GALTQ9NPC4 353 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 SERINC1Q9NRX5 453 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 GLRX2Q9NS18 164 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 C6orf203Q9P0P8 240 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 KLHL13Q9P2N7 655 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 CHRNA9Q9UGM1 479 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 NDRG3Q9UGV2 375 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 OSGIN1Q9UJX0 560 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF443Q9Y2A4 671 aaPredicted RBP10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 MTORP42345 2549 aa10.37□□□□□ -0.75
RABGGTA-216ENST00000560243 UQCRHLA0A096LP55 91 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMED7-TICAM2A0A0A6YYA0 188 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 A0A0G2JPF8 293 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 TMEM72A0PK05 275 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 ZC3H12DA2A288 527 aaKnown RBP10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 DEFB108AA8MXU0 73 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 HNRNPCL2B2RXH8 293 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 ZNF814B7Z6K7 855 aa10.36□□□□□ -0.75
RABGGTA-216ENST00000560243 HNRNPCL3B7ZW38 293 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms