RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 HS3ST5Q8IZT8 346 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 ZFP62Q8NB50 900 aaPredicted RBP16.4■□□□□ 0.22
CLPX-203ENST00000558958 RNF217Q8TC41 542 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 ACOT11Q8WXI4 607 aaPredicted RBP16.4■□□□□ 0.22
CLPX-203ENST00000558958 EME1Q96AY2 570 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 CRELD1Q96HD1 420 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 ZNF426Q9BUY5 554 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 OSGIN1Q9UJX0 560 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 TMCC3Q9ULS5 477 aa16.4■□□□□ 0.22
CLPX-203ENST00000558958 TNRC6AQ8NDV7 1962 aaKnown RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 A0A087WUJ7 227 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 A0A087WUU8 490 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 FAM47E-STBD1D6RA91 191 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 PDLIM1O00151 329 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 ZIC3O60481 467 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 GLSO94925 669 aaPredicted RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 PNMTP11086 282 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 GCKP35557 465 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 PTDSS1P48651 473 aaKnown RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 POLR2HP52434 150 aaKnown RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 HYAL4Q2M3T9 481 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 LINC00303Q3SY05 128 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 TBPL2Q6SJ96 375 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 Q6ZS92 163 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 PNPLA5Q7Z6Z6 429 aaPredicted RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 POC1BQ8TC44 478 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 TMEM255BQ8WV15 326 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 SLC39A7Q92504 469 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 ZBTB8AQ96BR9 441 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 MRGPRX4Q96LA9 322 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 NPAS1Q99742 590 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 C9orf16Q9BUW7 83 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 TTTY12Q9BZ98 90 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 PRORYQ9H606 182 aa16.39■□□□□ 0.21
CLPX-203ENST00000558958 PDP1Q9P0J1 537 aaPredicted RBP16.39■□□□□ 0.21
CLPX-203ENST00000558958 ELOA3DA6NLF2 546 aaPredicted RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 CCNB2O95067 398 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 PRKACGP22612 351 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 SRD5A2P31213 254 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 EIF1P41567 113 aaKnown RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 MERTKQ12866 999 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 FOXF1Q12946 379 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 ZNF169Q14929 603 aaPredicted RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 LRRC36Q1X8D7 754 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 ELOA3BQ3SY89 546 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 STK32CQ86UX6 486 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 ADGRG3Q86Y34 549 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 RBMXL3Q8N7X1 1067 aaKnown RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 ELOA3Q8NG57 546 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 GIPC3Q8TF64 312 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 TMEM239Q8WW34 195 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 HS6ST2Q96MM7 605 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 GABARAPL1Q9H0R8 117 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 ZNF703Q9H7S9 590 aaPredicted RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 B4GALT7Q9UBV7 327 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 DKKL1Q9UK85 242 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 ZMIZ1Q9ULJ6 1067 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 TP53TG5Q9Y2B4 290 aa16.38■□□□□ 0.21
CLPX-203ENST00000558958 MRPS18CQ9Y3D5 142 aaKnown RBP16.38■□□□□ 0.21
CLPX-203ENST00000558958 ATMQ13315 3056 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 TMED7-TICAM2A0A0A6YYA0 188 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 C7orf72A4D263 438 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 ARRDC5A6NEK1 342 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 HK1P19367 917 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 CXCR1P25024 350 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 GDF1P27539 372 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 ADH6P28332 368 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 RFC3P40938 356 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 APOBEC1P41238 236 aaKnown RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 RBM34P42696 430 aaKnown RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 LSM11P83369 360 aaKnown RBP eCLIP16.37■□□□□ 0.21
CLPX-203ENST00000558958 TMEM44Q2T9K0 475 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 GLYR1Q49A26 553 aaPredicted RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 OTUD3Q5T2D3 398 aaPredicted RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 ZNF770Q6IQ21 691 aaPredicted RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 ZNF730Q6ZMV8 503 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 ZBTB49Q6ZSB9 765 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 MBOAT2Q6ZWT7 520 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 LSRQ86X29 649 aaPredicted RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 GTPBP8Q8N3Z3 284 aaPredicted RBP16.37■□□□□ 0.21
CLPX-203ENST00000558958 CBR4Q8N4T8 237 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 LINC00471Q8N535 108 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 OR10G2Q8NGC3 310 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 OR4K5Q8NGD3 323 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 SDCCAG3Q96C92 435 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 DTNBP1Q96EV8 351 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 SLC29A1Q99808 456 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 PSD2Q9BQI7 771 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 COQ10BQ9H8M1 238 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 TUBD1Q9UJT1 453 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 TMED7Q9Y3B3 224 aa16.37■□□□□ 0.21
CLPX-203ENST00000558958 ACACBO00763 2458 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 SHISA8B8ZZ34 492 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 SOCS2O14508 198 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 FAM87AP0C7U9 286 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 UGT2B15P54855 530 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 FOXK1P85037 733 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 PLGLB1Q02325 96 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 TOMM20Q15388 145 aa16.36■□□□□ 0.21
CLPX-203ENST00000558958 TTC33Q6PID6 262 aaPredicted RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 97.1 ms