RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 RPS4Y1P22090 263 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ENPP1P22413 925 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 MAGEA8P43361 318 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ANXA11P50995 505 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 RAC3P60763 192 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 MERTKQ12866 999 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 GTF2IRD2BQ6EKJ0 949 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 DNAJC14Q6Y2X3 702 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 MSANTD1Q6ZTZ1 278 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 PLEKHM3Q6ZWE6 761 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 FCRLAQ7L513 359 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ZNF550Q7Z398 422 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 GTF2IRD2Q86UP8 949 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 FUNDC1Q8IVP5 155 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ABHD3Q8WU67 409 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 TMEM234Q8WY98 164 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 GTF2H4Q92759 462 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 NINJ1Q92982 152 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 CPNE4Q96A23 557 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 VPS33AQ96AX1 596 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ITCHQ96J02 903 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 EBF4Q9BQW3 602 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 CCDC28BQ9BUN5 200 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 CCDC106Q9BWC9 280 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 MTHFD2LQ9H903 347 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 VIPAS39Q9H9C1 493 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 TPT1P8Q9HAU6 139 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 TIGARQ9NQ88 270 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 TCF7L2Q9NQB0 619 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 EXOSC3Q9NQT5 275 aaKnown RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 CCM2LQ9NUG4 571 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 KLHL28Q9NXS3 571 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 ING1Q9UK53 422 aaPredicted RBP7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 USF3Q68DE3 2245 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 C2CD3Q4AC94 2353 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 PLCE1Q9P212 2302 aa7.83□□□□□ -1.16
SNRPA1-206ENST00000558059 HEATR1Q9H583 2144 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 IGHV3-15A0A0B4J1V0 119 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 LOC100996750A0A140TA64 210 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 HMGB1P1B2RPK0 211 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CASKO14936 926 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 THBDP07204 575 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PABPC4LP0CB38 370 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 NR2F1P10589 423 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 ETFAP13804 333 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 HOXB9P17482 250 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 KLK2P20151 261 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CRYGSP22914 178 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 AGTR1P30556 359 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 SLC7A1P30825 629 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 RYKP34925 604 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 KCNJ5P48544 419 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 ART1P52961 327 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PPP2R2AP63151 447 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 HPCAP84074 193 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 RNPS1Q15287 305 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 POU4F3Q15319 338 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 EXOC3L2Q2M3D2 409 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 ANKRD34AQ69YU3 496 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 C3orf33Q6P1S2 294 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 SLC2A7Q6PXP3 512 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 STAC2Q6ZMT1 411 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 TMPPEQ6ZT21 453 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 NUFIP2Q7Z417 695 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 ADGRG3Q86Y34 549 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 TUSC5Q8IXB3 177 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CMIPQ8IY22 773 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 ARFGAP2Q8N6H7 521 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CKAP2Q8WWK9 683 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PMM1Q92871 262 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 AURKBQ96GD4 344 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 OR5B2Q96R09 309 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 MED18Q9BUE0 208 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 KRTAP4-6Q9BYQ5 205 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 KLHL4Q9C0H6 718 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PAIP1Q9H074 479 aaKnown RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CXXC4Q9H2H0 198 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 C12orf49Q9H741 205 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 RMND5AQ9H871 391 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 GP6Q9HCN6 339 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 SLC52A3Q9NQ40 469 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 CTPS2Q9NRF8 586 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 SERINC1Q9NRX5 453 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 C6orf203Q9P0P8 240 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 KLHL13Q9P2N7 655 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PLEKHA6Q9Y2H5 1048 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 PCDHB14Q9Y5E9 798 aa7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 RAI1Q7Z5J4 1906 aaPredicted RBP7.82□□□□□ -1.16
SNRPA1-206ENST00000558059 AP3D1O14617 1153 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 SMAD9O15198 467 aaKnown RBP7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 POLR3GO15318 223 aaPredicted RBP7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 CYTIPO60759 359 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 SASH3O75995 380 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 PRKD3O94806 890 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 ANP32DO95626 131 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 DBIP07108 87 aaKnown RBP7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 YES1P07947 543 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 TFPTP0C1Z6 253 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 CD1EP15812 388 aa7.81□□□□□ -1.16
SNRPA1-206ENST00000558059 LOXP28300 417 aaPredicted RBP7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms