RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 B4GALNT2Q8NHY0 566 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 RELTQ969Z4 430 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 SAMD8Q96LT4 415 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 TBC1D23Q9NUY8 699 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 FAM186AA6NE01 2351 aa18.6■□□□□ 0.57
SNRPA1-205ENST00000558036 A0A087WXM4 84 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 CH25HO95992 272 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 SLC6A8P48029 635 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 P2RX1P51575 399 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 GAS1P54826 345 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 INPP5JQ15735 1006 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 ZNF791Q3KP31 576 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 TMPRSS11FQ6ZWK6 438 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 RPS19BP1Q86WX3 136 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 CDK20Q8IZL9 346 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 LRRC17Q8N6Y2 441 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 TCEANCQ8N8B7 351 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 OR51A7Q8NH64 312 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 TTC9Q92623 222 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 TSSK6Q9BXA6 273 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 METTL7AQ9H8H3 244 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 IL20Q9NYY1 176 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 EFCAB9A8MZ26 197 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 FAM20BO75063 409 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 HPP00738 406 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 CCDC159P0C7I6 412 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 RBMS1P29558 406 aaKnown RBP18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 CBFBQ13951 182 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 B3GNTL1Q67FW5 361 aaPredicted RBP18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 SLC27A4Q6P1M0 643 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 FANK1Q8TC84 345 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 DNAJA3Q96EY1 480 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 OR52D1Q9H346 318 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 MED11Q9P086 117 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 CDH10Q9Y6N8 788 aa18.59■□□□□ 0.57
SNRPA1-205ENST00000558036 PRKYO43930 277 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 PGCP20142 388 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 PTGDSP41222 190 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 GTF2A1P52655 376 aaPredicted RBP18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 QPRTQ15274 297 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 PRAMEF20Q5VT98 475 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 OR4Q3Q8NH05 313 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 GPR119Q8TDV5 335 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 ZNF566Q969W8 418 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 ANKRD10Q9NXR5 420 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 BLOC1S6Q9UL45 172 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 TMEM5Q9Y2B1 443 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 GPR52Q9Y2T5 361 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 YARS2Q9Y2Z4 477 aaKnown RBP18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 CHCHD2Q9Y6H1 151 aaPredicted RBP18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 EXPH5Q8NEV8 1989 aa18.58■□□□□ 0.57
SNRPA1-205ENST00000558036 PTPRZ1P23471 2315 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 RPL5P46777 297 aaKnown RBP18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 SMSP52788 366 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 C17orf67Q0P5P2 114 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 TOP3AQ13472 1001 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 NADK2Q4G0N4 442 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 ZNF468Q5VIY5 522 aaPredicted RBP18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 ZNF540Q8NDQ6 660 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 RNF138Q8WVD3 245 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 ASB15Q8WXK1 588 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 OSTF1Q92882 214 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 NPAS1Q99742 590 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 ADAM19Q9H013 955 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 DNAJC27Q9NZQ0 273 aa18.58■□□□□ 0.56
SNRPA1-205ENST00000558036 LOC400499M0QZD8 3231 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 CDRT15L2A8MXV6 281 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 TLX2O43763 284 aaPredicted RBP18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 PNMTP11086 282 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 ENDOUP21128 410 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 CASP3P42574 277 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 SSR4P51571 173 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 MLF1P58340 268 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 CXCR4P61073 352 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 EGR4Q05215 589 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 GXYLT1Q4G148 440 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 FOXB2Q5VYV0 432 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 ZNF773Q6PK81 442 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 THSD4Q6ZMP0 1018 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 OAFQ86UD1 273 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC15A4Q8N697 577 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 BRIX1Q8TDN6 353 aaKnown RBP18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 TNFRSF13CQ96RJ3 184 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 CCDC90BQ9GZT6 254 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 DLL3Q9NYJ7 618 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 ERVK-18Q9QC07 812 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 OSGIN1Q9UJX0 560 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 SIGLEC7Q9Y286 467 aa18.57■□□□□ 0.56
SNRPA1-205ENST00000558036 ICAM2P13598 275 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 TUBA4AP68366 448 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 SNAPC1Q16533 368 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 ARSKQ6UWY0 536 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 AHSA2Q719I0 299 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 MISPQ8IVT2 679 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 TMIGD2Q96BF3 282 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 SLC25A19Q9HC21 320 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 ASCL3Q9NQ33 180 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 SCN3BQ9NY72 215 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 TRIM64CA6NLI5 447 aa18.56■□□□□ 0.56
SNRPA1-205ENST00000558036 ENTPD6O75354 484 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms