RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 A0A1W2PNR3 127 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 A1L4Q6 167 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 WIPF3A6NGB9 483 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CD8B2A6NJW9 211 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 M0R3H8 397 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 FAAHO00519 579 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 GSTA4O15217 222 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CXCL13O43927 109 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 TGM6O95932 706 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CD247P20963 164 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 TACR3P29371 465 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 SLC1A3P43003 542 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CRYBA2P53672 197 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 RGS8P57771 180 aaPredicted RBP12.89□□□□□ -0.35
USP3-205ENST00000557884 RPS3AP61247 264 aaKnown RBP12.89□□□□□ -0.35
USP3-205ENST00000557884 SGCBQ16585 318 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CTU2Q2VPK5 515 aaKnown RBP12.89□□□□□ -0.35
USP3-205ENST00000557884 HBMQ6B0K9 141 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 WBP2NLQ6ICG8 309 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 TRPM8Q7Z2W7 1104 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 P4HA3Q7Z4N8 544 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 LACC1Q8IV20 430 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 PGAM4Q8N0Y7 254 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 C9orf106Q8NAJ2 232 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 BHLHE22Q8NFJ8 381 aaPredicted RBP12.89□□□□□ -0.35
USP3-205ENST00000557884 TNIP2Q8NFZ5 429 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 OR10D3Q8NH80 312 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 VANGL1Q8TAA9 524 aaPredicted RBP12.89□□□□□ -0.35
USP3-205ENST00000557884 FIG4Q92562 907 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 ADGRG7Q96K78 797 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CALHM2Q9HA72 323 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 SERINC1Q9NRX5 453 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 KLHL28Q9NXS3 571 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 CLCF1Q9UBD9 225 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 OSGIN1Q9UJX0 560 aa12.89□□□□□ -0.35
USP3-205ENST00000557884 TMED7-TICAM2A0A0A6YYA0 188 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 A0A0G2JNJ9 132 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 SLC22A20A6NK97 555 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 B2RBV5 119 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 CXCR6O00574 342 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 ADAMDEC1O15204 470 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 TOXO94900 526 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 LGI1O95970 557 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 TFPIP10646 304 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 NCK1P16333 377 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 HTR2AP28223 471 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 SLC7A1P30825 629 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 APOBEC1P41238 236 aaKnown RBP12.88□□□□□ -0.35
USP3-205ENST00000557884 KCNJ5P48544 419 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 MNAT1P51948 309 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 POLR2HP52434 150 aaKnown RBP12.88□□□□□ -0.35
USP3-205ENST00000557884 ZNF136P52737 540 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 DLX5P56178 289 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 NCALDP61601 193 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 PON3Q15166 354 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 CDSNQ15517 529 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 C3orf33Q6P1S2 294 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 C16orf89Q6UX73 402 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 ESPNLQ6ZVH7 1005 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 ADGRE4PQ86SQ3 457 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 ADGRG3Q86Y34 549 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 DEFB107AQ8IZN7 70 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 FAM156AQ8NDB6 213 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 FNDC9Q8TBE3 224 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 OR5B2Q96R09 309 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 CDRT15Q96T59 188 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 ARHGDIGQ99819 225 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 OR11A1Q9GZK7 315 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 Q9UFV3 132 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 CHRNA9Q9UGM1 479 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 RNF6Q9Y252 685 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 TMED7Q9Y3B3 224 aa12.88□□□□□ -0.35
USP3-205ENST00000557884 TMEM72A0PK05 275 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 GJE1A6NN92 205 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 FAM90A27PA6NNH2 459 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 SYT5O00445 386 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 UBOX5O94941 541 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 FESP07332 822 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 FREM3P0C091 2139 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 T-ENOLP0DO92 83 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 TCN1P20061 433 aaPredicted RBP12.87□□□□□ -0.35
USP3-205ENST00000557884 TNFRSF1BP20333 461 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 CALB2P22676 271 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 CXCR1P25024 350 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 KDELR2P33947 212 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 HTR3AP46098 478 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 CARD18P57730 90 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 NRF1Q16656 503 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 CYBRD1Q53TN4 286 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 SYT14P1Q58G82 188 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 PDSS1Q5T2R2 415 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 RIPPLY2Q5TAB7 128 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 RINLQ6ZS11 566 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 RBM45Q8IUH3 476 aaKnown RBP12.87□□□□□ -0.35
USP3-205ENST00000557884 GCNT2Q8N0V5 402 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 ZNF808Q8N4W9 903 aaPredicted RBP12.87□□□□□ -0.35
USP3-205ENST00000557884 NAXEQ8NCW5 288 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 RBM15BQ8NDT2 890 aaKnown RBP12.87□□□□□ -0.35
USP3-205ENST00000557884 OR52E4Q8NGH9 312 aa12.87□□□□□ -0.35
USP3-205ENST00000557884 OR4D11Q8NGI4 311 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms