RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 HCAR1Q9BXC0 346 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 GSX2Q9BZM3 304 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 C20orf85Q9H1P6 137 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 WDR26Q9H7D7 661 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 BRD7Q9NPI1 651 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 DEC1Q9P2X7 70 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 APOBEC3BQ9UH17 382 aaKnown RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 RWDD3Q9Y3V2 267 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 MUC22E2RYF6 1773 aaPredicted RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 ZNF879B4DU55 563 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 MEN1O00255 615 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 PDCD5O14737 125 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 TPPPO94811 219 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 LAMP2P13473 410 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ATF1P18846 271 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 NDUFS1P28331 727 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 NTHL1P78549 312 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 TNFRSF17Q02223 184 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ZNF234Q14588 700 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 LTB4RQ15722 352 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 ZCCHC12Q6PEW1 402 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 FAM111BQ6SJ93 734 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 SIX5Q8N196 739 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 SPICQ8N5J4 248 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 OR4K14Q8NGD5 310 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 THAP4Q8WY91 577 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 CDX2Q99626 313 aaPredicted RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 OR51V1Q9H2C8 321 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 XKR8Q9H6D3 395 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 POLE3Q9NRF9 147 aa15.07■□□□□ 0
SHMT2-232ENST00000557487 PHPT1Q9NRX4 125 aaPredicted RBP15.07■□□□□ 0
SHMT2-232ENST00000557487 A0A1W2PS29 197 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 ZC3H12DA2A288 527 aaKnown RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 M0R233 179 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 GPRIN2O60269 458 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 PTP4A3O75365 173 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 OR2T7P0C7T2 308 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 HTR2AP28223 471 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 SLC6A6P31641 620 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 PYCR1P32322 319 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 SLC16A1P53985 500 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 OR12D2P58182 307 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 SRP54P61011 504 aaKnown RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 ILF3Q12906 894 aaKnown RBP eCLIP15.06■□□□□ 0
SHMT2-232ENST00000557487 SUZ12Q15022 739 aaKnown RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 CDK5R1Q15078 307 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 EXOSC6Q5RKV6 272 aaKnown RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 RPL22L1Q6P5R6 122 aaKnown RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 GLRX5Q86SX6 157 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 BPHLQ86WA6 291 aaPredicted RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 OR6V1Q8N148 313 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 ZNF687Q8N1G0 1237 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 OR52E1Q8NGJ3 308 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 OR2T27Q8NH04 317 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 OR51Q1Q8NH59 317 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 NT5CQ8TCD5 201 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 SUSD6Q92537 303 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 DACT3Q96B18 629 aaPredicted RBP15.06■□□□□ 0
SHMT2-232ENST00000557487 ZNF559Q9BR84 538 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 NRIP3Q9NQ35 241 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 DUSP22Q9NRW4 184 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 MED9Q9NWA0 146 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 RPS6KB2Q9UBS0 482 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 HEBP2Q9Y5Z4 205 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 MYO10Q9HD67 2058 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 LAMA3Q16787 3333 aa15.06■□□□□ 0
SHMT2-232ENST00000557487 A0A1B0GVC2 190 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 IGLON5A6NGN9 336 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 A6NIN4 97 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 C5orf67F2Z3F1 127 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 MPC2O95563 127 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 UBL4AP11441 157 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 SNRPBP14678 240 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 CPN1P15169 458 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 PSMB1P20618 241 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 ACVR1BP36896 505 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 GDNFP39905 211 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 CCR6P51684 374 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 RPS15AP62244 130 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 BTN3A2P78410 334 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 RPL6Q02878 288 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 GGTLC2Q14390 218 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 POU4F3Q15319 338 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 DUSP5Q16690 384 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 TCEAL5Q5H9L2 206 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 FAAH2Q6GMR7 532 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 MRPL43Q8N983 215 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 DTX3Q8N9I9 347 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 OR2T35Q8NGX2 323 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 PFN4Q8NHR9 129 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 RBP7Q96R05 134 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 STACQ99469 402 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 GSDMCQ9BYG8 508 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 TMEM27Q9HBJ8 222 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 FBXL3Q9UKT7 428 aa15.05■□□□□ 0
SHMT2-232ENST00000557487 C19orf53Q9UNZ5 99 aaPredicted RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 PCDHGA9Q9Y5G4 932 aaKnown RBP15.05■□□□□ 0
SHMT2-232ENST00000557487 GABARAPH6UMI1 98 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 IFNA16P05015 189 aa15.05■□□□□ -0
SHMT2-232ENST00000557487 ATP1B1P05026 303 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms