RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 OR10H4Q8NGA5 316 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 HTRA1Q92743 480 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 SLC25A46Q96AG3 418 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 C3orf49Q96BT1 292 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ALG8Q9BVK2 526 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 TTTY10Q9BZA0 68 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 RTN4RQ9BZR6 473 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 NRSN2Q9GZP1 204 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 CHRNA10Q9GZZ6 450 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 RAB33BQ9H082 229 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 MIXL1Q9H2W2 232 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 C14orf119Q9NWQ9 140 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 RPS6KB2Q9UBS0 482 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 V9GYH0 126 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 TRIOBPQ9H2D6 2365 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ASXL3Q9C0F0 2248 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 FER1L5A0AVI2 2057 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 IGKV3D-11A0A0A0MRZ8 115 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 C4orf47A7E2U8 309 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 PRR23D1E9PI22 279 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 E9PI62 339 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 SLC30A4O14863 429 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 GMFGO60234 142 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 UTS2O95399 124 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 PRR23D2P0DMB1 279 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 CELP19835 753 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 AZGP1P25311 298 aaKnown RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 RBM34P42696 430 aaKnown RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ARL4DP49703 201 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 RPS7P62081 194 aaKnown RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 PSPHP78330 225 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 HSD11B2P80365 405 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 SERTAD2Q14140 314 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ULK3Q6PHR2 472 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 CBLN3Q6UW01 205 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 TMPRSS9Q7Z410 1059 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 MARCH9Q86YJ5 346 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ARIH2OSQ8N7S6 290 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 POC5Q8NA72 575 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 OR5M3Q8NGP4 307 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 OR52N1Q8NH53 320 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 DNASE2BQ8WZ79 361 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 SGTBQ96EQ0 304 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 CEP19Q96LK0 163 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 NEURL2Q9BR09 285 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 SLC30A2Q9BRI3 323 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 KATNB1Q9BVA0 655 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 NUDT9Q9BW91 350 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 JAM3Q9BX67 310 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 HDHD5Q9BXW7 423 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 MARCH7Q9H992 704 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 CRNNQ9UBG3 495 aaPredicted RBP9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF229Q9UJW7 825 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 ADAM18Q9Y3Q7 739 aa9.29□□□□□ -0.92
TMEM260-211ENST00000556648 LAMA1P25391 3075 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 IGKV1D-42A0A075B6H8 117 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 C2orf92A0A1B0GVN3 265 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CDC14CA4D256 554 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 FAM86C2PA6NEL3 165 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SAGE2PA6NJ88 616 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 RIIAD1A6NNX1 92 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 IL1AP01583 271 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 HIST1H1CP16403 213 aaKnown RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CCR4P51679 360 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 AFF3P51826 1226 aaKnown RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 HCCSP53701 268 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 PSMD4P55036 377 aaKnown RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SPANXN2Q5MJ10 180 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 RPL13AP3Q6NVV1 102 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CD200R1LQ6Q8B3 271 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SHISA6Q6ZSJ9 500 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SSX6Q7RTT6 188 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CADM3Q8N126 398 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SDR9C7Q8NEX9 313 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 OR52E2Q8NGJ4 325 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 OR4K13Q8NH42 304 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ZPLD1Q8TCW7 415 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SLC2A12Q8TD20 617 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF721Q8TF20 911 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CLDN23Q96B33 292 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SHDQ96IW2 340 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 KCTD7Q96MP8 289 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ZNF578Q96N58 590 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ERMAPQ96PL5 475 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 GAL3ST4Q96RP7 486 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 TEAD3Q99594 435 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CDX2Q99626 313 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 MESP1Q9BRJ9 268 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 EVA1AQ9H8M9 152 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ADGRL4Q9HBW9 690 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ABCB9Q9NP78 766 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 PRODH2Q9UF12 536 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 ATXN7L1Q9ULK2 861 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 COLQQ9Y215 455 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 SLC35A3Q9Y2D2 325 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 CMAHPQ9Y471 501 aa9.28□□□□□ -0.92
TMEM260-211ENST00000556648 COL5A1P20908 1838 aaPredicted RBP9.28□□□□□ -0.92
TMEM260-211ENST00000556648 A0A087WUJ7 227 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 IQCMA0A1B0GVH7 501 aa9.27□□□□□ -0.92
TMEM260-211ENST00000556648 TRDV1A0A1B0GX56 115 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms