RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ATG10Q9H0Y0 220 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 WFDC1Q9HC57 220 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 DMAP1Q9NPF5 467 aaPredicted RBP1.7□□□□□ -2.14
SNX6-204ENST00000555541 WARS2Q9UGM6 360 aaKnown RBP1.7□□□□□ -2.14
SNX6-204ENST00000555541 ANAPC7Q9UJX3 599 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 OARD1Q9Y530 152 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 MAD1L1Q9Y6D9 718 aa1.7□□□□□ -2.14
SNX6-204ENST00000555541 RPGRIP1LQ68CZ1 1315 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 SLC9B1P1A6NJY1 282 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 GIPP09681 153 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 PNMA6AP0CW24 399 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 ICAM2P13598 275 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 ZNF14P17017 642 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 CYLC1P35663 651 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 ATXN7L3Q14CW9 347 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 ABCA11PQ4W5N1 156 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 KLF17Q5JT82 389 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 C1orf100Q5SVJ3 147 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 ACOT7LQ6ZUV0 252 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 APTXQ7Z2E3 356 aaKnown RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 TTC5Q8N0Z6 440 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 SVOPLQ8N434 492 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 RNF148Q8N7C7 305 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 UBALD1Q8TB05 177 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 TIMD4Q96H15 378 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 VSTM2LQ96N03 204 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 ZNF641Q96N77 438 aaPredicted RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 TSG101Q99816 390 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 GAL3ST1Q99999 423 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 RIOK1Q9BRS2 568 aaKnown RBP1.69□□□□□ -2.14
SNX6-204ENST00000555541 ZNF670Q9BS34 389 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 TBCDQ9BTW9 1192 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 ZNF385DQ9H6B1 395 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 CALHM2Q9HA72 323 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 CLCA3PQ9Y6N3 262 aa1.69□□□□□ -2.14
SNX6-204ENST00000555541 NUP214P35658 2090 aaPredicted RBP1.68□□□□□ -2.14
SNX6-204ENST00000555541 IGLV2-18A0A075B6J9 118 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 CFAP73A6NFT4 308 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 COLCA2A8K830 154 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 GNA14O95837 355 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 P04436 131 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 HNF1AP20823 631 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 SELENOTP62341 195 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 ACTA2P62736 377 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 ACTC1P68032 377 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 TGFBR3Q03167 851 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 ZNF763Q0D2J5 394 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 RAB40BQ12829 278 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 SF3A2Q15428 464 aaKnown RBP1.68□□□□□ -2.14
SNX6-204ENST00000555541 KRTAP13-2Q52LG2 175 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 TMEM255AQ5JRV8 349 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 CTRB2Q6GPI1 263 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 OR6B2Q6IFH4 312 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 ZNF621Q6ZSS3 439 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 MIER3Q7Z3K6 550 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 HMGN2P46Q86SG4 172 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 MFSD6LQ8IWD5 586 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 OR5AU1Q8NGC0 362 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 OR56B4Q8NH76 319 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 NDRG1Q92597 394 aaKnown RBP1.68□□□□□ -2.14
SNX6-204ENST00000555541 FRZBQ92765 325 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 SPATA16Q9BXB7 569 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 SYTL2Q9HCH5 934 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 ANO10Q9NW15 660 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 MARCOQ9UEW3 520 aaPredicted RBP1.68□□□□□ -2.14
SNX6-204ENST00000555541 GNPTGQ9UJJ9 305 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 PLEKHH1Q9ULM0 1364 aa1.68□□□□□ -2.14
SNX6-204ENST00000555541 IQANK1A0A1B0GTG1 560 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 ANKRD30BLA7E2S9 258 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 E9PBE3 544 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 N4BP1O75113 896 aaKnown RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 SS18L1O75177 396 aaPredicted RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 RBBP9O75884 186 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 LGI1O95970 557 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 F10P00742 488 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 CELP19835 753 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 SFNP31947 248 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 NMUP48645 174 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 KLK7P49862 253 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 EFNB2P52799 333 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 BIDP55957 195 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 GABPB1Q06547 395 aaPredicted RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 ARL6IP1Q15041 203 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 CHRFAM7AQ494W8 412 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 CCDC40Q4G0X9 1142 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 C11orf71Q6IPW1 123 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 ACSM5Q6NUN0 579 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 SLC25A34Q6PIV7 304 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 CAMK2N1Q7Z7J9 78 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 BRSK1Q8TDC3 778 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 TMEM186Q96B77 213 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 PINX1Q96BK5 328 aaKnown RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 NSMCE2Q96MF7 247 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 HIST1H4GQ99525 98 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 SELENOIQ9C0D9 397 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 NAT10Q9H0A0 1025 aaKnown RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 SMPD3Q9NY59 655 aaPredicted RBP1.67□□□□□ -2.14
SNX6-204ENST00000555541 ATP6V1HQ9UI12 483 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 FOXJ3Q9UPW0 622 aa1.67□□□□□ -2.14
SNX6-204ENST00000555541 TRAPPC4Q9Y296 219 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms