RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 DNTTIP1Q9H147 329 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ISG20L2Q9H9L3 353 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MBNL1Q9NR56 388 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 KLHL28Q9NXS3 571 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MED11Q9P086 117 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 C5AR2Q9P296 337 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 CYB5R1Q9UHQ9 305 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 HEBP2Q9Y5Z4 205 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 GABARAPH6UMI1 98 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 GATBO75879 557 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 WNT1P04628 370 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ALDOBP05062 364 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 HOXB3P14651 431 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 CXCL2P19875 107 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 HIST1H1TP22492 207 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 GDNFP39905 211 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 BUD31P41223 144 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 RPS21P63220 83 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ACTC1P68032 377 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ACTA1P68133 377 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 PRR5P85299 388 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SGCGQ13326 291 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 GPM6BQ13491 265 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MLF2Q15773 248 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 CLEC12AQ5QGZ9 265 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ABHD17CQ6PCB6 329 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 ZC3H14Q6PJT7 736 aaKnown RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OVCH1Q7RTY7 1134 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 CLRN3Q8NCR9 226 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR2L5Q8NG80 312 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 OR51G2Q8NGK0 314 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MS4A6EQ96DS6 147 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MS4A3Q96HJ5 214 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 TIMP4Q99727 224 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 TAS2R5Q9NYW4 299 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 PIPOXQ9P0Z9 390 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 MGAT4CQ9UBM8 478 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SLC17A4Q9Y2C5 497 aa9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 SIRT4Q9Y6E7 314 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-210ENST00000555252 IGKV1-8A0A0C4DH67 115 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 GSAPA4D1B5 854 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRR19A6NJB7 356 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRR23D1E9PI22 279 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 EMC8O43402 210 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRICKLE3O43900 615 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CREBL2O60519 120 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 MT-ND4P03905 459 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CHRM4P08173 479 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 SYPP08247 313 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRR23D2P0DMB1 279 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 EPXP11678 715 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CSNK2A2P19784 350 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 FCARP24071 287 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 ATP5A1P25705 553 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CMPK1P30085 196 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRKAR1BP31321 381 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 BCL6P41182 706 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 OR10A3P58181 314 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 ZNF626Q68DY1 528 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 DMKNQ6E0U4 476 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 ZNF793Q6ZN11 406 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 SZRD1Q7Z422 152 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CPOQ8IVL8 374 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 MCATQ8IVS2 390 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PDZD9Q8IXQ8 264 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 STPG2Q8N412 459 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 AMER3Q8N944 861 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 MFSD9Q8NBP5 474 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 BEST4Q8NFU0 473 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 C1QTNF2Q9BXJ5 285 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 TTYH1Q9H313 450 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 PRDM7Q9NQW5 492 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 SEMA4GQ9NTN9 838 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 DZANK1Q9NVP4 752 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 OR6C2Q9NZP2 312 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CNIH4Q9P003 139 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 CHST2Q9Y4C5 530 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 OR1A2Q9Y585 309 aa9.9□□□□□ -0.82
MTHFD1-210ENST00000555252 SOCS6O14544 535 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 DVL2O14641 736 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 FLRT2O43155 660 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HIST1H2ABP04908 130 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ATP1B1P05026 303 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ANKRD34CP0C6C1 535 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 GABRA1P14867 456 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 MPIP34949 423 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 MNDAP41218 407 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 CBX5P45973 191 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 STXBP1P61764 594 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 LSM11P83369 360 aaKnown RBP eCLIP9.89□□□□□ -0.839e-6■□□□□ 8.7
MTHFD1-210ENST00000555252 POU4F2Q12837 409 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 GK2Q14410 553 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 HLXQ14774 488 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ZSWIM7Q19AV6 140 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 UAP1L1Q3KQV9 507 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC25A35Q3KQZ1 300 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ZNF776Q68DI1 518 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 TANGO2Q6ICL3 276 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 SLC48A1Q6P1K1 146 aa9.89□□□□□ -0.83
MTHFD1-210ENST00000555252 ARL9Q6T311 187 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms