RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 C12orf10Q9HB07 376 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TMEM27Q9HBJ8 222 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TVP23BQ9NYZ1 205 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TMEM5Q9Y2B1 443 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 EXOGQ9Y2C4 368 aaKnown RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 OR10H1Q9Y4A9 318 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 A0A1W2PNU3 283 aaPredicted RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 FAM47E-STBD1D6RA91 191 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TNFRSF10AO00220 468 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 MEN1O00255 615 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 GALR2O43603 387 aaPredicted RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 MTRF1O75570 445 aaKnown RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 DAB2P98082 770 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 NFATC3Q12968 1075 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 SPCS2Q15005 226 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 PCOLCEQ15113 449 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 ALG10BQ5I7T1 473 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 PHF19Q5T6S3 580 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 CASP12Q6UXS9 341 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 ATCAYQ86WG3 371 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 PRR22Q8IZ63 422 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 SLC43A2Q8N370 569 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 LRRC75AQ8NAA5 344 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 OR52I1Q8NGK6 324 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 OR13C2Q8NGS9 318 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 COX4I2Q96KJ9 171 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 DDOQ99489 341 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 NDEL1Q9GZM8 345 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 PLGRKTQ9HBL7 147 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 TOR4AQ9NXH8 423 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 DIMT1Q9UNQ2 313 aaKnown RBP8.14□□□□□ -1.11
TDP1-210ENST00000554976 RALGAPA1Q6GYQ0 2036 aa8.14□□□□□ -1.11
TDP1-210ENST00000554976 CCDC182A6NF36 153 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 OR6C70A6NIJ9 312 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 KHNYNO15037 678 aaKnown RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 MAN1A2O60476 641 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SLC2A10O95528 541 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 IFI30P13284 250 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 IFNA8P32881 189 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 PTGDSP41222 190 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 RFX3P48380 749 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SLC30A6Q6NXT4 461 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 CPEB2Q7Z5Q1 589 aaKnown RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 PRSS58Q8IYP2 241 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ZNF527Q8NB42 609 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SUMF1Q8NBK3 374 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 FANK1Q8TC84 345 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ELP5Q8TE02 316 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 LGALS12Q96DT0 336 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SAMD8Q96LT4 415 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 Q96MT0 163 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 DACH2Q96NX9 599 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 TMEM43Q9BTV4 400 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 TSSK6Q9BXA6 273 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SLC19A3Q9BZV2 496 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 KRCC1Q9NPI7 259 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 TBC1D23Q9NUY8 699 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 MED31Q9Y3C7 131 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 HRH3Q9Y5N1 445 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 FUOMA2VDF0 154 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 CDC14CA4D256 554 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 PRODHO43272 600 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ZNF264O43296 627 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 TLX2O43763 284 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 DYRK3O43781 588 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 FZD7O75084 574 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 HEXBP07686 556 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 INHBBP09529 407 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 NR0B1P51843 470 aaKnown RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 TUBA1BP68363 451 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 C6orf183Q5T699 404 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 WBP2NLQ6ICG8 309 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 RPL13AP3Q6NVV1 102 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SMARCD3Q6STE5 483 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 TUBA1AQ71U36 451 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ZNF367Q7RTV3 350 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 NANOGP1Q8N7R0 232 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 AGBL5Q8NDL9 886 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 C9orf43Q8TAL5 461 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 RORBQ92753 470 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ATOH1Q92858 354 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 CRELD1Q96HD1 420 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 LRR1Q96L50 414 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 OR5M11Q96RB7 305 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ADOQ96SZ5 270 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 TIMP4Q99727 224 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 FN3KQ9H479 309 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 COPS7AQ9UBW8 275 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 CHRNA9Q9UGM1 479 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 IGHV1-45A0A0A0MS14 117 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 A0A1W2PPW3 197 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 ETV2O00321 342 aaPredicted RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 CSO75390 466 aaKnown RBP8.13□□□□□ -1.11
TDP1-210ENST00000554976 DLGAP3O95886 979 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 IGHA1P01876 353 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 CSTF2P33240 577 aaKnown RBP eCLIP8.13□□□□□ -1.11
TDP1-210ENST00000554976 ETV5P41161 510 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 BCAP31P51572 246 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 MLLT10P55197 1068 aa8.13□□□□□ -1.11
TDP1-210ENST00000554976 SLC26A5P58743 744 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms