RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 TAS2R41P59536 307 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 LARS2Q15031 903 aaKnown RBP10.21□□□□□ -0.77
SHMT2-216ENST00000554975 SYPL1Q16563 259 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 C3AR1Q16581 482 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ZSWIM7Q19AV6 140 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ZNF404Q494X3 552 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ENTPD8Q5MY95 495 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 MFSD4BQ5TF39 518 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 KIRREL2Q6UWL6 708 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 TMEM107Q6UX40 140 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 SHISA6Q6ZSJ9 500 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 RNF44Q7L0R7 432 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 RRM2BQ7LG56 351 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 VN1R4Q7Z5H5 301 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OR4N4Q8N0Y3 316 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 CLDN22Q8N7P3 220 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ACBD4Q8NC06 268 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OR4K5Q8NGD3 323 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OR4K14Q8NGD5 310 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OR6Q1Q8NGQ2 317 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 MCFD2Q8NI22 146 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 NRGNQ92686 78 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 TANKQ92844 425 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 LGALS12Q96DT0 336 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ELP4Q96EB1 424 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 SH3YL1Q96HL8 342 aaPredicted RBP10.21□□□□□ -0.77
SHMT2-216ENST00000554975 THOC3Q96J01 351 aaKnown RBP10.21□□□□□ -0.77
SHMT2-216ENST00000554975 DACH2Q96NX9 599 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 CSF3RQ99062 836 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OCEL1Q9H607 264 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 MED17Q9NVC6 651 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 C14orf105Q9NVL8 296 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 GALNT8Q9NY28 637 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 PLA2G3Q9NZ20 509 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 TINAGQ9UJW2 476 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 OSGIN1Q9UJX0 560 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 A4GNTQ9UNA3 340 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 ATG4BQ9Y4P1 393 aa10.21□□□□□ -0.77
SHMT2-216ENST00000554975 HYKKA2RU49 373 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ISPDA4D126 451 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 H0YGG7 62 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 M0R3H8 397 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 FFAR1O14842 300 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 DSCR3O14972 297 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 B4GALT2O60909 372 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 COQ9O75208 318 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 F10P00742 488 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 GASTP01350 101 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 CHRM4P08173 479 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 CD63P08962 238 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 OCM2P0CE71 109 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 OCMP0CE72 109 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF888P0CJ79 500 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ENDOUP21128 410 aaKnown RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 POU1F1P28069 291 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 MC3RP41968 323 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 SLC15A1P46059 708 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 OR1D4P47884 311 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 PCYT1AP49585 367 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 RGS8P57771 180 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ARF3P61204 181 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 BTN3A2P78410 334 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 MFAP5Q13361 173 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 MAPK11Q15759 364 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 TRIM16LQ309B1 348 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 KLHL22Q53GT1 634 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ARMCX4Q5H9R4 360 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF311Q5JNZ3 666 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 YOD1Q5VVQ6 348 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 HEPHL1Q6MZM0 1159 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 MFSD12Q6NUT3 480 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 RPL13AP3Q6NVV1 102 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 C1orf94Q6P1W5 598 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 CSPG4Q6UVK1 2322 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 PLEKHM3Q6ZWE6 761 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF554Q86TJ5 538 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 RANBP3LQ86VV4 465 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 SLC43A2Q8N370 569 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 B3GNT7Q8NFL0 401 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 OR5D16Q8NGK9 328 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 RFKQ969G6 155 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 HSPBAP1Q96EW2 488 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 TMEM80Q96HE8 168 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF681Q96N22 645 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 SPSB2Q99619 263 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 AICDAQ9GZX7 198 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 KLHL31Q9H511 634 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 CHCHD3Q9NX63 227 aaKnown RBP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 REV1Q9UBZ9 1251 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.2□□□□□ -0.78
SHMT2-216ENST00000554975 ZNF232Q9UNY5 417 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 PEX16Q9Y5Y5 336 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 MAU2Q9Y6X3 613 aa10.2□□□□□ -0.78
SHMT2-216ENST00000554975 FN1P02751 2386 aaKnown RBP10.19□□□□□ -0.78
SHMT2-216ENST00000554975 METTL15A6NJ78 407 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 MED26O95402 600 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 CLDN14O95500 239 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 RAB36O95755 333 aa10.19□□□□□ -0.78
SHMT2-216ENST00000554975 STATHP02808 62 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms