RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 MPP4Q96JB8 637 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 VSTM2LQ96N03 204 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 PIGQQ9BRB3 760 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 AIG1Q9NVV5 245 aa7.95□□□□□ -1.14
TDP1-208ENST00000553989 MRPS18CQ9Y3D5 142 aaKnown RBP7.95□□□□□ -1.14
TDP1-208ENST00000553989 MED12LQ86YW9 2145 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 CCDC154A6NI56 674 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TRIM64CA6NLI5 447 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 KIAA1324LA8MWY0 1029 aaPredicted RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 H0YAE9 185 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 LINC01387J3KSC0 135 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 NR5A2O00482 541 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 PIP5K1BO14986 540 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 EMC8O43402 210 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TNFRSF21O75509 655 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TRMUO75648 421 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 CNOT4O95628 575 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 NTSP30990 170 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TIA1P31483 386 aaKnown RBP eCLIP7.94□□□□□ -1.14
TDP1-208ENST00000553989 PTH2RP49190 550 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 POLR2JP52435 117 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 SUCLG1P53597 346 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 PSMD4P55036 377 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 CTBP2P56545 445 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 B3GALT5-AS1P59052 145 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 MERTKQ12866 999 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 NFYCQ13952 458 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 DECR1Q16698 335 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 LRRC23Q53EV4 343 aaPredicted RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 CLEC6AQ6EIG7 209 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TTC33Q6PID6 262 aaPredicted RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 TMEM107Q6UX40 140 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 GPRIN3Q6ZVF9 776 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 PLEKHM3Q6ZWE6 761 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 DHRSXQ8N5I4 330 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZNF610Q8N9Z0 462 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 OR2M3Q8NG83 312 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 OR7G2Q8NG99 324 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 METTL6Q8TCB7 284 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 C16orf78Q8WTQ4 265 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TMEM171Q8WVE6 324 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 CANT1Q8WVQ1 401 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 NMD3Q96D46 503 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 APIPQ96GX9 242 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 PPP3R2Q96LZ3 170 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 C3orf30Q96M34 536 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZNF382Q96SR6 550 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZBTB18Q99592 522 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ACPTQ9BZG2 426 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 TBL1XR1Q9BZK7 514 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 RNF122Q9H9V4 155 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 Q9N2J8 555 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 FANCFQ9NPI8 374 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 SLC52A3Q9NQ40 469 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 MIEF1Q9NQG6 463 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 SLC35C2Q9NQQ7 365 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 DDX18Q9NVP1 670 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 ETAA1Q9NY74 926 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 RSL24D1Q9UHA3 163 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 MRTO4Q9UKD2 239 aaKnown RBP7.94□□□□□ -1.14
TDP1-208ENST00000553989 ABCG2Q9UNQ0 655 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZNF232Q9UNY5 417 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 EMC9Q9Y3B6 208 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZNF337Q9Y3M9 751 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ZNF175Q9Y473 711 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 CEPT1Q9Y6K0 416 aa7.94□□□□□ -1.14
TDP1-208ENST00000553989 ARID1AO14497 2285 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 OR2M5A3KFT3 312 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 SLC28A1O00337 649 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 NME4O00746 187 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 EIF1AYO14602 144 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 PLOD3O60568 738 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 PGM3O95394 542 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ANXA4P09525 319 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 ALDOCP09972 364 aaKnown RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 LINC00032P0C843 101 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 CD8BP10966 210 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ATP6V1B1P15313 513 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 TBXA2RP21731 343 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 PCYT1AP49585 367 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 GAS1P54826 345 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ATP5J2P56134 94 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 CLDN15P56746 228 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 CLDN20P56880 219 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 PSG6Q00889 435 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 LIPEQ05469 1076 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ZNF763Q0D2J5 394 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 EPS8Q12929 822 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ATP6AP1Q15904 470 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 FXNQ16595 210 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 IMPG1Q17R60 797 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 SLC36A3Q495N2 470 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 CYP27C1Q4G0S4 372 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ATP6AP1LQ52LC2 224 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 BEX5Q5H9J7 111 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 C6orf10Q5SRN2 563 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 CYP2R1Q6VVX0 501 aa7.93□□□□□ -1.14
TDP1-208ENST00000553989 ZNF704Q6ZNC4 412 aaPredicted RBP7.93□□□□□ -1.14
TDP1-208ENST00000553989 FAM214BQ7L5A3 538 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms