RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

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Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 SFRP4Q6FHJ7 346 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 ETFBKMTQ8IXQ9 262 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 OR2L13Q8N349 312 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 OR51A7Q8NH64 312 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 SMIM19Q96E16 107 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 PEX11GQ96HA9 241 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 C10orf90Q96M02 699 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 MFRPQ9BY79 579 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 CDCP1Q9H5V8 836 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 OR6C2Q9NZP2 312 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 RABL2AQ9UBK7 228 aaPredicted RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 RABL2BQ9UNT1 228 aa16.23■□□□□ 0.19
SYNE3-202ENST00000553340 AK6Q9Y3D8 172 aaKnown RBP16.23■□□□□ 0.19
SYNE3-202ENST00000553340 A0A1W2PPL8 197 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 G3V3Q6 166 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 CDK2AP1O14519 115 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 OGG1O15527 345 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 LYPD3O95274 346 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 GYPBP06028 91 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 C4BPBP20851 252 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 ERVFC1P60507 584 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TSPAN5P62079 268 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TP53I3Q53FA7 332 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 PXDC1Q5TGL8 231 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 IZUMO1Q8IYV9 350 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF619Q8N2I2 560 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 GALNT11Q8NCW6 608 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 LGALS14Q8TCE9 139 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 CMTM3Q96MX0 182 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 ORAI3Q9BRQ5 295 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TEX101Q9BY14 249 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 DEC1Q9P2X7 70 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 PPIEQ9UNP9 301 aaKnown RBP16.22■□□□□ 0.19
SYNE3-202ENST00000553340 BAIAP2Q9UQB8 552 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 NOTCH4Q99466 2003 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TRAV27A0A087WT01 109 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 SYNDIG1LA6NDD5 238 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 PPP1R3DO95685 299 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 PSMB1P20618 241 aaKnown RBP16.22■□□□□ 0.19
SYNE3-202ENST00000553340 CMPK1P30085 196 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 PTGS2P35354 604 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 CAMK1Q14012 370 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 AMZ1Q400G9 498 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 SLC39A5Q6ZMH5 540 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 LINGO2Q7L985 606 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 OVCH1Q7RTY7 1134 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 SAMD14Q8IZD0 417 aaPredicted RBP16.22■□□□□ 0.19
SYNE3-202ENST00000553340 UXS1Q8NBZ7 420 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 OR11G2Q8NGC1 345 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 POF1BQ8WVV4 589 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TTTY10Q9BZA0 68 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 ZNF350Q9GZX5 532 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 RDH8Q9NYR8 311 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 RCE1Q9Y256 329 aa16.22■□□□□ 0.19
SYNE3-202ENST00000553340 TRPM6Q9BX84 2022 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 TUBAL3A6NHL2 446 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 OR52A4PA6NMU1 304 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GATBO75879 557 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 PCDH8O95206 1070 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 UCHL1P09936 223 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 NID1P14543 1247 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 TYRP1P17643 537 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 CCR9P51686 369 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GBX2P52951 348 aaPredicted RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 CDK5R1Q15078 307 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 METTL11BQ5VVY1 283 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 PLPP4Q5VZY2 271 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GRASPQ7Z6J2 395 aaPredicted RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 KCT2Q8NC54 265 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 OR4K14Q8NGD5 310 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 OR2T4Q8NH00 348 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 SUSD6Q92537 303 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 RBPMSQ93062 196 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 MBNL1Q9NR56 388 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 SPHK1Q9NYA1 384 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 MRPL15Q9P015 296 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 FLVCR2Q9UPI3 526 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 PCDHGA9Q9Y5G4 932 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 SNRNP200O75643 2136 aaKnown RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GMDSO60547 372 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 ECDO95905 644 aaPredicted RBP16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GNRH1P01148 92 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 CEBPBP17676 345 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 ACTA2P62736 377 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 ACTG2P63267 376 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 SEZ6L2Q6UXD5 910 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 GPAT4Q86UL3 456 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 CMTM4Q8IZR5 234 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 DEFB118Q96PH6 123 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 HRASLSQ9HDD0 168 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 POMT2Q9UKY4 750 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 DENND4AQ7Z401 1863 aa16.21■□□□□ 0.19
SYNE3-202ENST00000553340 NAP1L6A6NFF2 107 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 FMO6PO60774 539 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 PTP4A3O75365 173 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 IFNGP01579 166 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 ATP1B1P05026 303 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 RPS4Y1P22090 263 aaKnown RBP16.2■□□□□ 0.18
SYNE3-202ENST00000553340 VEGFCP49767 419 aa16.2■□□□□ 0.18
SYNE3-202ENST00000553340 TNFRSF17Q02223 184 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms