RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 TRIB1Q96RU8 372 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 GPATCH1Q9BRR8 931 aaKnown RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 NAA11Q9BSU3 229 aaPredicted RBP9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 POTEKPQ9BYX7 375 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 MUC13Q9H3R2 512 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 PIF1Q9H611 641 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 EMC3Q9P0I2 261 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 KLHL9Q9P2J3 617 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 KCNE5Q9UJ90 142 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 RPS6KA6Q9UK32 745 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 EMC9Q9Y3B6 208 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 BAHCC1Q9P281 2608 aa9.26□□□□□ -0.93
TRAFD1-208ENST00000552890 FREM3P0C091 2139 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PCNX1Q96RV3 2341 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PRAMEF27A3QJZ7 478 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 CLCA1A8K7I4 914 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 A8MVM7 634 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 M0QX08 132 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 FXYD1O00168 92 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SULT2B1O00204 365 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ZG16O60844 167 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SEMA7AO75326 666 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 MFN2O95140 757 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 VAMP5O95183 116 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PMS2P2O95744 297 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PSMA4P25789 261 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 EIF1AXP47813 144 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 CTBP2P56545 445 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 CLDN15P56746 228 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PSME3P61289 254 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC35A1P78382 337 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SF3A3Q12874 501 aaKnown RBP eCLIP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 FOXF1Q12946 379 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 TMEM176BQ3YBM2 270 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SYT14P1Q58G82 188 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 C1QTNF12Q5T7M4 302 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ZNF613Q6PF04 617 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ZNF836Q6ZNA1 936 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 UBQLNLQ8IYU4 475 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 MICU2Q8IYU8 434 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PGAM4Q8N0Y7 254 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 POU5F2Q8N7G0 328 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 OR52E4Q8NGH9 312 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 STK35Q8TDR2 534 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SMPDL3BQ92485 455 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 CNOT9Q92600 299 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 OSTF1Q92882 214 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ZG16BQ96DA0 208 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 GMPPAQ96IJ6 420 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 NSL1Q96IY1 281 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 KCTD14Q9BQ13 255 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC39A3Q9BRY0 314 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 TAPBPLQ9BX59 468 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 RTN4RQ9BZR6 473 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ADAM19Q9H013 955 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 C1orf21Q9H246 121 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ALG2Q9H553 416 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 TMEM181Q9P2C4 612 aa9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 USP9YO00507 2555 aaPredicted RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 PHF3Q92576 2039 aaKnown RBP9.25□□□□□ -0.93
TRAFD1-208ENST00000552890 ELOA3DA6NLF2 546 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 SEC14L5O43304 696 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 GMFGO60234 142 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 PRKD3O94806 890 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 GOSR1O95249 250 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ZIC2O95409 532 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 LGI1O95970 557 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 GPIP06744 558 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 NUDT7P0C024 238 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 TMIGD3P0DMS9 266 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 TFPIP10646 304 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 THRBP10828 461 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ENPP1P22413 925 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 GTF2E2P29084 291 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 KDELR2P33947 212 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 KCNJ5P48544 419 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC7A2P52569 658 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 NUP107P57740 925 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 LIPEQ05469 1076 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 PDK3Q15120 406 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 TAF11Q15544 211 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ELOA3BQ3SY89 546 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 MTX3Q5HYI7 312 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 RABL3Q5HYI8 236 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 TMPPEQ6ZT21 453 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 CYP4Z1Q86W10 505 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 VRK2Q86Y07 508 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 PTOV1Q86YD1 416 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ZZZ3Q8IYH5 903 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ELOA3Q8NG57 546 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 OR6S1Q8NH40 331 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 OR10D3Q8NH80 312 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 PIGXQ8TBF5 258 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ITLN2Q8WWU7 325 aaPredicted RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 ZNF583Q96ND8 569 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 TUBA1CQ9BQE3 449 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 SLC19A3Q9BZV2 496 aa9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 QRSL1Q9H0R6 528 aaKnown RBP9.24□□□□□ -0.93
TRAFD1-208ENST00000552890 RNF122Q9H9V4 155 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms