RNA–Protein interactions for RNA: ENST00000552823.5

LIMA1-215, Transcript of LIM domain and actin binding 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LIMA1, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-215ENST00000552823 TMPRSS9Q7Z410 1059 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 RDH10Q8IZV5 341 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 OR2L13Q8N349 312 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 FAM26EQ8N5C1 309 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ACBD7Q8N6N7 88 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 MOSPD2Q8NHP6 518 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 GPBAR1Q8TDU6 330 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 SNX33Q8WV41 574 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ZNRF4Q8WWF5 429 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 PTP4A1Q93096 173 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 C8orf44Q96CB5 159 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ABHD8Q96I13 439 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ARHGDIGQ99819 225 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 PRSS27Q9BQR3 290 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 NUDT22Q9BRQ3 303 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CDCA4Q9BXL8 241 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 PDE7BQ9NP56 450 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 RPRD1BQ9NQG5 326 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CDH10Q9Y6N8 788 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CDHR4A6H8M9 788 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ELOA3DA6NLF2 546 aaPredicted RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 MCIDASD6RGH6 385 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 SMLR1H3BR10 107 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 GABRPO00591 440 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 SURF4O15260 269 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 AQP9O43315 295 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TSC22D2O75157 780 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 WISP1O95388 367 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 PSKH1P11801 424 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 NID1P14543 1247 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 HIST1H1CP16403 213 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 RPS5P46782 204 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 EIF1AXP47813 144 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 OR2B6P58173 313 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 YPEL5P62699 121 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TUBA1BP68363 451 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TDGQ13569 410 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CD226Q15762 336 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TOMM34Q15785 309 aaPredicted RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ELOA3BQ3SY89 546 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TRIQKQ629K1 86 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CNIH2Q6PI25 160 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TUBA1AQ71U36 451 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 MARCH3Q86UD3 253 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 EGFL6Q8IUX8 553 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 SAMD12Q8N8I0 201 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 C19orf18Q8NEA5 215 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 C17orf47Q8NEP4 570 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ELOA3Q8NG57 546 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 OR5M1Q8NGP8 315 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ZNF671Q8TAW3 534 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 GPR119Q8TDV5 335 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 VMP1Q96GC9 406 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ORAI3Q9BRQ5 295 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TTYH2Q9BSA4 534 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 KATNB1Q9BVA0 655 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 MROQ9BYG7 248 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 PPIL3Q9H2H8 161 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 UBE2ZQ9H832 354 aaPredicted RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 ASB6Q9NWX5 421 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CNOT2Q9NZN8 540 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 NLKQ9UBE8 527 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CRNNQ9UBG3 495 aaPredicted RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 NUFIP1Q9UHK0 495 aaKnown RBP5.15□□□□□ -1.58
LIMA1-215ENST00000552823 CBLCQ9ULV8 474 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 VDAC3Q9Y277 283 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 TSC22D4Q9Y3Q8 395 aa5.15□□□□□ -1.58
LIMA1-215ENST00000552823 DSPPQ9NZW4 1301 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 TRAV6A0A075B6T7 132 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 KIR2DS5A0A0G2JLQ3 304 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 A0A0G2JNG1 304 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 FAM221BA6H8Z2 402 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ACOD1A6NK06 481 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 G3V3Y1 287 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 KIR2DS3K7RE56 304 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 MBTPS2O43462 519 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ASNA1O43681 348 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 SLITRK5O94991 958 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 PDGFBP01127 241 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-215ENST00000552823 HMGN1P05114 100 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 IMPDH2P12268 514 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 FOLR1P15328 257 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 TGM1P22735 817 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 PRKAR1BP31321 381 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 STAT5AP42229 794 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 RAB38P57729 211 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 FBXW4P57775 412 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 UBE2IP63279 158 aaKnown RBP5.15□□□□□ -1.59
LIMA1-215ENST00000552823 KIR2DS5Q14953 304 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ELOCQ15369 112 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 NDUFA9Q16795 377 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 PTCRAQ6ISU1 281 aaPredicted RBP5.15□□□□□ -1.59
LIMA1-215ENST00000552823 TMEM184AQ6ZMB5 413 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 RTL4Q6ZR62 310 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 OR5J2Q8NH18 312 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ENKURQ8TC29 256 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 ASB15Q8WXK1 588 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 SMPDL3BQ92485 455 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 MOAP1Q96BY2 351 aa5.15□□□□□ -1.59
LIMA1-215ENST00000552823 TEAD3Q99594 435 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms