RNA–Protein interactions for RNA: ENST00000552691.1

ERBB3-220, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 3

Gene ERBB3, Length 291 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-220ENST00000552691 C9orf43Q8TAL5 461 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 RNF217Q8TC41 542 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 POC1BQ8TC44 478 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 DNAJA4Q8WW22 397 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 TMEM234Q8WY98 164 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 ST8SIA1Q92185 356 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 NR4A3Q92570 626 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SLC38A4Q969I6 547 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 C3orf49Q96BT1 292 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SLC41A3Q96GZ6 507 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 CENPNQ96H22 339 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 MRGPRX4Q96LA9 322 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 DHRS1Q96LJ7 313 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 ZNF347Q96SE7 839 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 PIP5K1AQ99755 562 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 PKP2Q99959 881 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 PRSS27Q9BQR3 290 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 FUZQ9BT04 418 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 BDH2Q9BUT1 245 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 FNDC11Q9BVV2 318 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 TTTY12Q9BZ98 90 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SLC25A18Q9H1K4 315 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SEMA6AQ9H2E6 1030 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 ZNF703Q9H7S9 590 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 NMNAT1Q9HAN9 279 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 RNPEPL1Q9HAU8 725 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 NTN4Q9HB63 628 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 AGPAT4Q9NRZ5 378 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 MAN2C1Q9NTJ4 1040 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 ACER3Q9NUN7 267 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 MED17Q9NVC6 651 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 QPCTLQ9NXS2 382 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 VNN3Q9NY84 501 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SELENONQ9NZV5 590 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 STX18Q9P2W9 335 aaKnown RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 RHCGQ9UBD6 479 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 RPS6KB2Q9UBS0 482 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 DNAJB9Q9UBS3 223 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 NKX1-2Q9UD57 310 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 OSGIN1Q9UJX0 560 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SLC7A7Q9UM01 511 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 VDAC3Q9Y277 283 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 RPH3AQ9Y2J0 694 aaPredicted RBP3.85□□□□□ -1.79
ERBB3-220ENST00000552691 C15orf41Q9Y2V0 281 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 TESMINQ9Y4I5 508 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 LYVE1Q9Y5Y7 322 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 U3KQV3 271 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 NBASA2RRP1 2371 aa3.85□□□□□ -1.79
ERBB3-220ENST00000552691 SPTA1P02549 2419 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 A0A087WUU8 490 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 A0A087WZY1 265 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 TMED7-TICAM2A0A0A6YYA0 188 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 TRBV4-1A0A0J9YWV2 114 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 SH3PXD2BA1X283 911 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 OR2M5A3KFT3 312 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 C7orf72A4D263 438 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ELOA3DA6NLF2 546 aaPredicted RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 FAM166BA8MTA8 275 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 FAM47E-STBD1D6RA91 191 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ERVH48-1M5A8F1 160 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ACOT7O00154 380 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 TNFRSF11BO00300 401 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 WISP2O76076 250 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 NTN1O95631 604 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ATP6V1G2O95670 118 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 HPNP05981 417 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 CELA3AP09093 270 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 PNMTP11086 282 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 SFTPCP11686 197 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ZNF17P17021 662 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ZNF23P17027 643 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 HK1P19367 917 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 IL11P20809 199 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 PTNP21246 168 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 FPR1P21462 350 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 TCEA1P23193 301 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 CXCR1P25024 350 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 APOBEC1P41238 236 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 EIF1P41567 113 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 HTR3AP46098 478 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 LIMS1P48059 325 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 POLR2HP52434 150 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 SMIM11AP58511 58 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 B3GALT5-AS1P59052 145 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 PPIAP62937 165 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 PMP22Q01453 160 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ALDH6A1Q02252 535 aaKnown RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 EGR4Q05215 589 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 MERTKQ12866 999 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 FOXF1Q12946 379 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 LY6DQ14210 128 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 SLC10A1Q14973 349 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 TRAM2Q15035 370 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 INAQ16352 499 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 EXOC3L2Q2M3D2 409 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 ELOA3BQ3SY89 546 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 FGD3Q5JSP0 725 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 WIPI1Q5MNZ9 446 aaPredicted RBP3.84□□□□□ -1.79
ERBB3-220ENST00000552691 DCST1Q5T197 706 aa3.84□□□□□ -1.79
ERBB3-220ENST00000552691 SWT1Q5T5J6 900 aaKnown RBP3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms