RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 PAICSP22234 425 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF791Q3KP31 576 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 VWA2Q5GFL6 755 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 YOD1Q5VVQ6 348 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 TSSK4Q6SA08 328 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF322Q6U7Q0 402 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CCDC190Q86UF4 302 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 PARP16Q8N5Y8 322 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ACBD7Q8N6N7 88 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 MINDY2Q8NBR6 621 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 SPRYD4Q8WW59 207 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CCDC74AQ96AQ1 378 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 C3orf49Q96BT1 292 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 PPP1R14BQ96C90 147 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 TEAD3Q99594 435 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 IER2Q9BTL4 223 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF768Q9H5H4 540 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 FGF21Q9NSA1 209 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 TOR4AQ9NXH8 423 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CAB39Q9Y376 341 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ADAMTS20P59510 1910 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 A0A1B0GX78 115 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 C12orf71A8MTZ7 269 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 LRRTM2O43300 516 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 AKAP8O43823 692 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 HPGDP15428 266 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 DHPSP49366 369 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CD226Q15762 336 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF181Q2M3W8 571 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 KLHL12Q53G59 568 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ARHGAP40Q5TG30 622 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 C1orf189Q5VU69 101 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 LYSMD4Q5XG99 296 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 FCRLBQ6BAA4 426 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 CD200R1LQ6Q8B3 271 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 TMEM99Q8N816 258 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 ZFP41Q8N8Y5 198 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 GATSQ8NAP1 163 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 GUCD1Q96NT3 240 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 TM9SF2Q99805 663 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 NUDT9Q9BW91 350 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 SMURF1Q9HCE7 757 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 RHBDL2Q9NX52 303 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 MRTO4Q9UKD2 239 aaKnown RBP12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 RP1P56715 2156 aa12.86□□□□□ -0.35
RAB3IP-216ENST00000552199 COL5A1P20908 1838 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 SEC16AO15027 2179 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 SCDO00767 359 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 OIP5O43482 229 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 NDUFB2O95178 105 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 UBL4AP11441 157 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 ZNF3P17036 446 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC2A5P22732 501 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 TGM1P22735 817 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 NOS3P29474 1203 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 HOXA6P31267 233 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 FGF9P31371 208 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC9A3P48764 834 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 DCAF7P61962 342 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 FABP5Q01469 135 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 CSTF1Q05048 431 aaKnown RBP12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 CRMP1Q14194 572 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 NSDHLQ15738 373 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 WBP2NLQ6ICG8 309 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 ARHGAP11AQ6P4F7 1023 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 APOOLQ6UXV4 268 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 TMPRSS11AQ6ZMR5 421 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 MAMSTRQ6ZN01 415 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 OR5M3Q8NGP4 307 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 PHOSPHO1Q8TCT1 267 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 SLC25A46Q96AG3 418 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 KCTD7Q96MP8 289 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 CCNL2Q96S94 520 aaPredicted RBP12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 OR51V1Q9H2C8 321 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 EXOSC3Q9NQT5 275 aaKnown RBP12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 PRDM6Q9NQX0 595 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 UGT2A1Q9Y4X1 527 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 CABIN1Q9Y6J0 2220 aa12.85□□□□□ -0.35
RAB3IP-216ENST00000552199 CCDC163A0A0D9SF12 145 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 C2orf92A0A1B0GVN3 265 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TRDV1A0A1B0GX56 115 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ISPDA4D126 451 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 C19orf67A6NJJ6 358 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 IFNGP01579 166 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 RPS7P62081 194 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 SKP2Q13309 424 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 SPANXN2Q5MJ10 180 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 TMEM71Q6P5X7 295 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 KANSL1Q7Z3B3 1105 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 LYSMD2Q8IV50 215 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 LRRC17Q8N6Y2 441 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 CYB561A3Q8NBI2 242 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 OR14A16Q8NHC5 309 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 DAZLQ92904 295 aaKnown RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ART5Q96L15 291 aa12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 ERMAPQ96PL5 475 aaPredicted RBP12.84□□□□□ -0.35
RAB3IP-216ENST00000552199 MED18Q9BUE0 208 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms