RNA–Protein interactions for RNA: ENST00000551642.1

DEPDC4-210, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,033 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-210ENST00000551642 HEPHL1Q6MZM0 1159 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ANKRD26P1Q6NSI1 321 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ISLR2Q6UXK2 745 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SHISA6Q6ZSJ9 500 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 CPEB2Q7Z5Q1 589 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ANKRD37Q7Z713 158 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 YTHDF3Q7Z739 585 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 CCDC71Q8IV32 467 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 PRSS58Q8IYP2 241 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 LRRC25Q8N386 305 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 RPRMLQ8N4K4 120 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 VPS37AQ8NEZ2 397 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 OR9I1Q8NGQ6 314 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 PSMA8Q8TAA3 256 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SUN3Q8TAQ9 357 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ZNF675Q8TD23 568 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 EXOSC8Q96B26 276 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 CTHRC1Q96CG8 243 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ERP27Q96DN0 273 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SPDL1Q96EA4 605 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ZBED6CLQ96FA7 236 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 RBM18Q96H35 190 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 VPS50Q96JG6 964 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 GPR137Q96N19 417 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 AMDHD1Q96NU7 426 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 OR52E6Q96RD3 313 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 BBS4Q96RK4 519 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ZNF700Q9H0M5 742 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 EPS8L2Q9H6S3 715 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 CXorf21Q9HAI6 301 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 ADAP2Q9NPF8 381 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 KCNJ16Q9NPI9 418 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SERTAD4Q9NUC0 356 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 COQ3Q9NZJ6 369 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 CCDC167Q9P0B6 97 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SH3BP4Q9P0V3 963 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 C19orf25Q9UFG5 118 aaPredicted RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 BTNL2Q9UIR0 455 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 FBXL4Q9UKA2 621 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 PPIEQ9UNP9 301 aaKnown RBP5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 HS3ST3B1Q9Y662 390 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 SACSQ9NZJ4 4579 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 MED12Q93074 2177 aa5.87□□□□□ -1.47
DEPDC4-210ENST00000551642 DYNC2H1Q8NCM8 4307 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 A0A087WV62 115 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 IGHV1-45A0A0A0MS14 117 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 TRAV17A0A0B4J275 112 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 A0A1W2PP18 115 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 A0A1W2PRB8 838 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ASPDHA6ND91 283 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 BBIP1A8MTZ0 92 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 PLOD2O00469 737 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 CFLARO15519 480 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ARHGEF9O43307 516 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR10H2O60403 315 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 COX6A1P12074 109 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 PRDX6P30041 224 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 FEN1P39748 380 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MAP2K6P52564 334 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 NME5P56597 212 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR4D2P58180 307 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 CBX1P83916 185 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ID2Q02363 134 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 CAPRIN1Q14444 709 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MAPRE2Q15555 327 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MAPKAPK3Q16644 382 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 PRICKLE4Q2TBC4 344 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ZNF750Q32MQ0 723 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 PGS1Q32NB8 556 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 SFT2D3Q587I9 215 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 COQ5Q5HYK3 327 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 SFRP4Q6FHJ7 346 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR4F3Q6IEY1 312 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 FAM180BQ6P0A1 224 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 KIRREL2Q6UWL6 708 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ARSKQ6UWY0 536 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 LANCL3Q6ZV70 420 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 P3H2Q8IVL5 708 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR4N5Q8IXE1 308 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MORN4Q8NDC4 146 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR14A16Q8NHC5 309 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 RP9Q8TA86 221 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 PTPMT1Q8WUK0 201 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 OR5P2Q8WZ92 322 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 DAZLQ92904 295 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 RIT1Q92963 219 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 TSLPQ969D9 159 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 CIDECQ96AQ7 238 aaPredicted RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ITCHQ96J02 903 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 CCDC115Q96NT0 180 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 DGAT2Q96PD7 388 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 SECISBP2Q96T21 854 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 LPAR4Q99677 370 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MESP1Q9BRJ9 268 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 ACTRT3Q9BYD9 372 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 GLIPR2Q9H4G4 154 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 RMND5AQ9H871 391 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 SERHLQ9NQF3 203 aa5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 MRPS18AQ9NVS2 196 aaKnown RBP5.86□□□□□ -1.47
DEPDC4-210ENST00000551642 TAS2R9Q9NYW1 312 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms