RNA–Protein interactions for RNA: ENST00000546378.1

HOXC11-202, Transcript of homeobox C11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC11, Length 3,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-202ENST00000546378 OR14C36Q8NHC7 312 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 DTD2Q96FN9 168 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 INSM2Q96T92 566 aaPredicted RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 SPATA5L1Q9BVQ7 753 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 TMEM74BQ9NUR3 256 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 CDV3Q9UKY7 258 aaKnown RBP13.59□□□□□ -0.23
HOXC11-202ENST00000546378 PLXNA3P51805 1871 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 GBF1Q92538 1859 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 FRYLO94915 3013 aa13.59□□□□□ -0.23
HOXC11-202ENST00000546378 FAM86C2PA6NEL3 165 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SURF4O15260 269 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SELENOFO60613 162 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 IFNA7P01567 189 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 UBL4AP11441 157 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 M6PRP20645 277 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 DDX6P26196 483 aaKnown RBP eCLIP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 DCUN1D3Q8IWE4 304 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SUN3Q8TAQ9 357 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 OSTF1Q92882 214 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SMARCD2Q92925 531 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 POP5Q969H6 163 aaKnown RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 FBXW5Q969U6 566 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SLC35A4Q96G79 324 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SEC22AQ96IW7 307 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 PCDHGB7Q9Y5F8 929 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 A0A1B0GVI7 797 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 C5orf67F2Z3F1 127 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF593O00488 134 aaPredicted RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 FLRT2O43155 660 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 VASPP50552 380 aaPredicted RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 DLX2Q07687 328 aaPredicted RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 AANATQ16613 207 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SCGB2B2Q4G0G5 96 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 B3GNTL1Q67FW5 361 aaPredicted RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 TMEM65Q6PI78 240 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 KIAA1324Q6UXG2 1013 aaKnown RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 UBE3DQ7Z6J8 389 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 OR7G2Q8NG99 324 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 OR5M1Q8NGP8 315 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 WDFY2Q96P53 400 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 SLC38A1Q9H2H9 487 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 PIGUQ9H490 435 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 ZFP64Q9NPA5 681 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 MAB21L2Q9Y586 359 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 ADH1CP00326 375 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 MT-ND5P03915 603 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 ZNF888P0CJ79 500 aaPredicted RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 GABRA3P34903 492 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 PTH2RP49190 550 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 CDK5Q00535 292 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 TSPAN31Q12999 210 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 MRPL2Q5T653 305 aaKnown RBP13.58□□□□□ -0.24
HOXC11-202ENST00000546378 C1orf94Q6P1W5 598 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 C19orf48Q6RUI8 117 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 ARSKQ6UWY0 536 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 TMPRSS12Q86WS5 348 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 OR5M3Q8NGP4 307 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 NMNAT3Q96T66 252 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 FOLH1BQ9HBA9 442 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 KCND3Q9UK17 655 aa13.58□□□□□ -0.24
HOXC11-202ENST00000546378 CACNB4O00305 520 aaPredicted RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 ADRB3P13945 408 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 GDI1P31150 447 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 GUCA2AQ02747 115 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 DUSP5Q16690 384 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 TUSC1Q2TAM9 212 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 PUS10Q3MIT2 529 aaKnown RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 WDR88Q6ZMY6 472 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 CCL4L1Q8NHW4 92 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 ACOT12Q8WYK0 555 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 HSPA12BQ96MM6 686 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 HHIPQ96QV1 700 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 LYSMD1Q96S90 227 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 GTPBP2Q9BX10 602 aaKnown RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 SFXN1Q9H9B4 322 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 NOX4Q9NPH5 578 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 SIDT1Q9NXL6 827 aaKnown RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 BAIAP2Q9UQB8 552 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 IER3IP1Q9Y5U9 82 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 DSPPQ9NZW4 1301 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 UNC119BA6NIH7 251 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 A8MVJ9 347 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 FOXE1O00358 373 aaPredicted RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 CCSO14618 274 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 PLGP00747 810 aaPredicted RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 GSTM3P21266 225 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 CSNK1G2P78368 415 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 PDE7AQ13946 482 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 DUSP6Q16828 381 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 NKPD1Q17RQ9 610 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 EOGTQ5NDL2 527 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 HEPHL1Q6MZM0 1159 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 NLRC3Q7RTR2 1065 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 GRAMD2AQ8IUY3 354 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 PATE1Q8WXA2 126 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 ELF4Q99607 663 aaPredicted RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 ADAT1Q9BUB4 502 aaKnown RBP13.57□□□□□ -0.24
HOXC11-202ENST00000546378 NIPAL2Q9H841 368 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 A4GALTQ9NPC4 353 aa13.57□□□□□ -0.24
HOXC11-202ENST00000546378 ANAPC1Q9H1A4 1944 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms