RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 TMEM251Q8N6I4 163 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 FADS6Q8N9I5 356 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 WDSUB1Q8N9V3 476 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 OR4K17Q8NGC6 315 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 OR1J4Q8NGS1 313 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 PHOSPHO1Q8TCT1 267 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 NR4A3Q92570 626 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 PMM1Q92871 262 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 DTNBP1Q96EV8 351 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SH3YL1Q96HL8 342 aaPredicted RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF583Q96ND8 569 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF607Q96SK3 696 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SLX1AQ9BQ83 275 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SPATA5L1Q9BVQ7 753 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 UBQLN3Q9H347 655 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ZDHHC11Q9H8X9 412 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 HHATLQ9HCP6 504 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SDHAF3Q9NRP4 125 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 ADA2Q9NZK5 511 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 TMEM181Q9P2C4 612 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 DKKL1Q9UK85 242 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 FBXL2Q9UKC9 423 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 RALYQ9UKM9 306 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SLC35A3Q9Y2D2 325 aa5.75□□□□□ -1.49
PRKDC-211ENST00000546304 SPTBN1Q01082 2364 aaKnown RBP5.75□□□□□ -1.49
PRKDC-211ENST00000546304 TENM4Q6N022 2769 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CDHR4A6H8M9 788 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PRORSD1PA6NEY8 169 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 FAM47E-STBD1D6RA91 191 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF264O43296 627 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 GMFGO60234 142 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 SERPINB7O75635 380 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CYP7B1O75881 506 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PDE5AO76074 875 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 OPN1SWP03999 348 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 RFPL3SP0C7P2 107 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PABPC4LP0CB38 370 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 HSD17B1P14061 328 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 IL7RP16871 459 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PRKAR1BP31321 381 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PGM1P36871 562 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF41P51814 821 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 TDGF1P3P51864 188 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CRYBA2P53672 197 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 MLLT10P55197 1068 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PPIAP62937 165 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 EEF1A1P68104 462 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 KCNJ10P78508 379 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ALDH6A1Q02252 535 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 C17orf67Q0P5P2 114 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 BNIP1Q12981 228 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 VEZF1Q14119 521 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 LARS2Q15031 903 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 SPATS1Q496A3 300 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CMPK2Q5EBM0 449 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 LCE4AQ5TA78 99 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF324BQ6AW86 544 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 DHRS4L2Q6PKH6 230 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CBLN3Q6UW01 205 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 C6orf89Q6UWU4 347 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 RINLQ6ZS11 566 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PATL1Q86TB9 770 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 VRK2Q86Y07 508 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ARMC8Q8IUR7 673 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ARHGAP24Q8N264 748 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZNF843Q8N446 348 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CISD2Q8N5K1 135 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 RNF148Q8N7C7 305 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 FAM156AQ8NDB6 213 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 TOR1AIP2Q8NFQ8 470 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 TNIP2Q8NFZ5 429 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 OR2M3Q8NG83 312 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 OR52P1PQ8NH57 321 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 B4GALNT2Q8NHY0 566 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CPT1CQ8TCG5 803 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 FAR1Q8WVX9 515 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 FIG4Q92562 907 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 TAMM41Q96BW9 452 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CCDC124Q96CT7 223 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZG16BQ96DA0 208 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 SNRNP40Q96DI7 357 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 C1GALT1C1Q96EU7 318 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 GNRHR2Q96P88 292 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 OR2B2Q9GZK3 357 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 C1orf21Q9H246 121 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PTGES2Q9H7Z7 377 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 MTHFD2LQ9H903 347 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 EXOSC3Q9NQT5 275 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 AGPAT4Q9NRZ5 378 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 QPCTLQ9NXS2 382 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 FBLN5Q9UBX5 448 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 SEC14L3Q9UDX4 400 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 MAGEL2Q9UJ55 1249 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PACSIN3Q9UKS6 424 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 PRPF19Q9UMS4 504 aaKnown RBP5.74□□□□□ -1.49
PRKDC-211ENST00000546304 CARD8Q9Y2G2 431 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 IFT52Q9Y366 437 aa5.74□□□□□ -1.49
PRKDC-211ENST00000546304 LIPGQ9Y5X9 500 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms