RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 MEAF6Q9HAF1 191 aa6□□□□□ -1.45
LDHA-223ENST00000545215 KCNK13Q9HB14 408 aa6□□□□□ -1.45
LDHA-223ENST00000545215 C1orf109Q9NX04 203 aa6□□□□□ -1.45
LDHA-223ENST00000545215 LYARQ9NX58 379 aaKnown RBP6□□□□□ -1.45
LDHA-223ENST00000545215 KLHL28Q9NXS3 571 aa6□□□□□ -1.45
LDHA-223ENST00000545215 PDP1Q9P0J1 537 aaPredicted RBP6□□□□□ -1.45
LDHA-223ENST00000545215 C19orf25Q9UFG5 118 aaPredicted RBP6□□□□□ -1.45
LDHA-223ENST00000545215 ZDHHC2Q9UIJ5 367 aa6□□□□□ -1.45
LDHA-223ENST00000545215 SLC12A4Q9UP95 1085 aa6□□□□□ -1.45
LDHA-223ENST00000545215 SPACA6W5XKT8 324 aa6□□□□□ -1.45
LDHA-223ENST00000545215 IGHV3-20A0A0C4DH32 117 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 GOLGA8QA0A0J9YX86 632 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 GOLGA8OA6NCC3 632 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 GMNCA6NCL1 334 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A18PA6NE21 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A16PA6NEW6 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A9PA6NNJ1 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A5PA8MXJ8 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 GOLGA8NF8WBI6 632 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 EBAG9O00559 213 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ERI3O43414 337 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 GALR3O60755 368 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 LYPLA1O75608 230 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 PPP1R3DO95685 299 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A15PP0C7V4 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM90A14PP0C7W9 464 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SMIM10L1P0DMW3 83 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 PRPS2P11908 318 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 IL1RNP18510 177 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 TLX1P31314 330 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 ARRB2P32121 409 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 RPS19P39019 145 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 RPL3P39023 403 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 SSR2P43308 183 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 XCR1P46094 333 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 FOXA1P55317 472 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 RPS13P62277 151 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 PPIAP62937 165 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 GNGT1P63211 74 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 BIKQ13323 160 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ABRAXAS2Q15018 415 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 BTBD16Q32M84 506 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ZNF385BQ569K4 471 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SGO1Q5FBB7 561 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 TOR1AIP1Q5JTV8 583 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 METTL21CQ5VZV1 264 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 CLEC6AQ6EIG7 209 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 OR4C11Q6IEV9 310 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 OGFOD2Q6N063 350 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 TMEM205Q6UW68 189 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ZNF704Q6ZNC4 412 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 FAM47EQ6ZV65 393 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LANCL3Q6ZV70 420 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 IKBIPQ70UQ0 350 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SPATA19Q7Z5L4 167 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 CPEB2Q7Z5Q1 589 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 CPLX4Q7Z7G2 160 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SAMD14Q8IZD0 417 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 METTL4Q8N3J2 472 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 NATD1Q8N6N6 113 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 OR51Q1Q8NH59 317 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 CEP70Q8NHQ1 597 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ACTRT2Q8TDY3 377 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 UTP15Q8TED0 518 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 PROX1Q92786 737 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 TUBGCP3Q96CW5 907 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SMIM10Q96HG1 83 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 COG8Q96MW5 612 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ZNF317Q96PQ6 595 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 CCDC28BQ9BUN5 200 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ACPTQ9BZG2 426 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 C20orf27Q9GZN8 174 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 CXorf36Q9H7Y0 433 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 WDR41Q9HAD4 459 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LYRM4Q9HD34 91 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SLCO1B3Q9NPD5 702 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 G6PC2Q9NQR9 355 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 TMEM45AQ9NWC5 275 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 ASIC5Q9NY37 505 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 PHF11Q9UIL8 331 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 RABL2BQ9UNT1 228 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 MRPS33Q9Y291 106 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 TIMM22Q9Y584 194 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LIPGQ9Y5X9 500 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 GMEB1Q9Y692 573 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 USH1CQ9Y6N9 552 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LYSTQ99698 3801 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SGK494L7N484 410 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 M0QZ24 198 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 PSMD12O00232 456 aaPredicted RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 PLPP1O14494 284 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LSM1O15116 133 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 SEC22BO75396 215 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 RDH16O75452 317 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 SOD3P08294 240 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 LINC00032P0C843 101 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 DANCRP0C864 163 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 RNH1P13489 461 aaKnown RBP5.99□□□□□ -1.45
LDHA-223ENST00000545215 LBPP18428 481 aa5.99□□□□□ -1.45
LDHA-223ENST00000545215 HIST1H1TP22492 207 aaPredicted RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms