RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 VSTM2LQ96N03 204 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 SLC38A2Q96QD8 506 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 TAAR6Q96RI8 345 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 NODALQ96S42 347 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 MCHR1Q99705 422 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 OR10A5Q9H207 317 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 SYNPO2LQ9H987 977 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 FOLH1BQ9HBA9 442 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 UBQLN4Q9NRR5 601 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 MED17Q9NVC6 651 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 DNAJB12Q9NXW2 375 aaKnown RBP7.66□□□□□ -1.18
CHD4-208ENST00000540960 TINAGQ9UJW2 476 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 PCDHGB1Q9Y5G3 927 aa7.66□□□□□ -1.18
CHD4-208ENST00000540960 ANK2Q01484 3957 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 C2orf92A0A1B0GVN3 265 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CDHR4A6H8M9 788 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CCDC160A6NGH7 325 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 FRG2CA6NGY1 282 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 C17orf105B2RV13 164 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 RGS10O43665 173 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 PPM1BO75688 479 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 KCNK2O95069 426 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CBX7O95931 251 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 TFAP2AP05549 437 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 KLK3P07288 261 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 NGFRP08138 427 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SMIM18P0DKX4 95 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 FPR3P25089 353 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MST1P26927 711 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 PIGAP37287 484 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 ADH7P40394 386 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 GCGRP47871 477 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SLC6A8P48029 635 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 GPR143P51810 404 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 RRADP55042 308 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 NRG3P56975 720 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SNRPGP62308 76 aaKnown RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 EEF1A1P68104 462 aaKnown RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 ID2Q02363 134 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 DUSP2Q05923 314 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.65□□□□□ -1.18
CHD4-208ENST00000540960 CD47Q08722 323 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 TSPAN31Q12999 210 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 GANABQ14697 944 aaKnown RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 ZNF169Q14929 603 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 MAD2L1BPQ15013 274 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 NSDHLQ15738 373 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 GPR68Q15743 365 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 NPTX1Q15818 432 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MINDY4Q4G0A6 757 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 ENTPD8Q5MY95 495 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SLC25A30Q5SVS4 291 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MFSD4BQ5TF39 518 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 ZNF770Q6IQ21 691 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 C1orf94Q6P1W5 598 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MBOAT2Q6ZWT7 520 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 PRSS48Q7RTY5 328 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 PRSS41Q7RTY9 318 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 PPP1R3BQ86XI6 285 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 HS3ST5Q8IZT8 346 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 BCORP1Q8N888 145 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SLC38A9Q8NBW4 561 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 OR5L2Q8NGL0 311 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 OR6T1Q8NGN1 323 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 OR8J1Q8NGP2 316 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 OR52J3Q8NH60 311 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 OR1L3Q8NH93 324 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 RHOXF1Q8NHV9 184 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 TEX47Q8TBZ9 253 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MR1Q95460 341 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 RFKQ969G6 155 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 TP53INP1Q96A56 240 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 HSPBAP1Q96EW2 488 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 SENP5Q96HI0 755 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 TSC22D3Q99576 134 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CNPPD1Q9BV87 410 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 DUSP21Q9H596 190 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 NPDC1Q9NQX5 325 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 LANCL2Q9NS86 450 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 VNN3Q9NY84 501 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CNOT2Q9NZN8 540 aaKnown RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 RPS6KB2Q9UBS0 482 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 TCFL5Q9UL49 500 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MKLN1Q9UL63 735 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 CBLCQ9ULV8 474 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 A4GNTQ9UNA3 340 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 BAIAP2Q9UQB8 552 aa7.65□□□□□ -1.18
CHD4-208ENST00000540960 MAGED1Q9Y5V3 778 aaPredicted RBP7.65□□□□□ -1.18
CHD4-208ENST00000540960 IGLV3-12A0A075B6K2 115 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 IGKV3D-11A0A0A0MRZ8 115 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 TCRBV16S1A1N1A0A5B0 115 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 PRAMEF27A3QJZ7 478 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 ZAR1LA6NP61 321 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 C9J4A7 227 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 H3BMH7 237 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 H3BN98 237 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 M0R3H8 397 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SLC1A7O00341 560 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 SCDO00767 359 aa7.64□□□□□ -1.19
CHD4-208ENST00000540960 TO15178 435 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms