RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MPLP40238 635 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 CD83Q01151 205 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 AMZ1Q400G9 498 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ZNF613Q6PF04 617 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 TPRA1Q86W33 373 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SLC37A3Q8NCC5 494 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PTP4A1Q93096 173 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 WDR92Q96MX6 357 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 TEAD3Q99594 435 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ZNF559Q9BR84 538 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ENKD1Q9H0I2 346 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 MED20Q9H944 212 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 IL21RQ9HBE5 538 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ATP13A2Q9NQ11 1180 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 CYSLTR2Q9NS75 346 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 C20orf141Q9NUB4 165 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 KCNE5Q9UJ90 142 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SLC35A3Q9Y2D2 325 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 MED31Q9Y3C7 131 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ALG5Q9Y673 324 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SPTBN2O15020 2390 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 A6NCN8 305 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ORC5O43913 435 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 GDF9O60383 454 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ZNF217O75362 1048 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PTP4A3O75365 173 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 MAP3K8P41279 467 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 RFX3P48380 749 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 TPMTP51580 245 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PPP2CBP62714 309 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PPP2CAP67775 309 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 YIF1BQ5BJH7 314 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PRRT3Q5FWE3 981 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 IDNKQ5T6J7 187 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 B3GLCTQ6Y288 498 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 UTS2BQ765I0 119 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 ZNF438Q7Z4V0 828 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SLC43A2Q8N370 569 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 NLGN4YQ8NFZ3 816 aaPredicted RBP13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SLC2A12Q8TD20 617 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 PIGKQ92643 395 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 BPIFA2Q96DR5 249 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 LOXL4Q96JB6 756 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 NDC1Q9BTX1 674 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 IFT27Q9BW83 186 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 HCAR1Q9BXC0 346 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 RXFP3Q9NSD7 469 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 HAO2Q9NYQ3 351 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 NLKQ9UBE8 527 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 SIGLEC7Q9Y286 467 aa13.43□□□□□ -0.26
CDCA3-207ENST00000538862 LRRC72A6NJI9 287 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 PATE3B3GLJ2 98 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 PEX12O00623 359 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 BRINP1O60477 761 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 SOX30O94993 753 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 GPR75O95800 540 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 FUT1P19526 365 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 NT5EP21589 574 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 TALDO1P37837 337 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ACTR1BP42025 376 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ACTR1AP61163 376 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 RACK1P63244 317 aaKnown RBP13.42□□□□□ -0.26
CDCA3-207ENST00000538862 PRICKLE4Q2TBC4 344 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 KLHL12Q53G59 568 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 MANEAQ5SRI9 462 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 NR2C2APQ86WQ0 139 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 OR10H4Q8NGA5 316 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ZFPM2Q8WW38 1151 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 TOE1Q96GM8 510 aaKnown RBP13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ZFYVE21Q9BQ24 234 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 NIPAL2Q9H841 368 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 TMEM27Q9HBJ8 222 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 TMEM74BQ9NUR3 256 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ACTR10Q9NZ32 417 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 USP36Q9P275 1121 aaKnown RBP13.42□□□□□ -0.26
CDCA3-207ENST00000538862 CLCA3PQ9Y6N3 262 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 ADAMTS9Q9P2N4 1935 aa13.42□□□□□ -0.26
CDCA3-207ENST00000538862 LOC105369274A0A096LPK9 316 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 LOC102723532A0A0G2JNH3 316 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 ZC3H12DA2A288 527 aaKnown RBP13.41□□□□□ -0.26
CDCA3-207ENST00000538862 RIIAD1A6NNX1 92 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 FGF17O60258 216 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 SBK2P0C263 348 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 PTNP21246 168 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 DRD5P21918 477 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 RBMS1P29558 406 aaKnown RBP13.41□□□□□ -0.26
CDCA3-207ENST00000538862 CTAG1AP78358 180 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 POU6F2P78424 691 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-207ENST00000538862 CSRP2Q16527 193 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 PLA2G2CQ5R387 149 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 C6orf183Q5T699 404 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 THSD4Q6ZMP0 1018 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 RD3Q7Z3Z2 195 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 OR4N4Q8N0Y3 316 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 ZNF655Q8N720 491 aaPredicted RBP13.41□□□□□ -0.26
CDCA3-207ENST00000538862 YIPF7Q8N8F6 280 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 TEX19Q8NA77 164 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 OR4C6Q8NH72 309 aa13.41□□□□□ -0.26
CDCA3-207ENST00000538862 CCL4L1Q8NHW4 92 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms