RNA–Protein interactions for RNA: ENST00000536872.5

COPS7A-205, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 871 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-205ENST00000536872 CEACAM8P31997 349 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-205ENST00000536872 PCGF2P35227 344 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 TIMP3P35625 211 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 ACAA2P42765 397 aaKnown RBP17.3■□□□□ 0.36
COPS7A-205ENST00000536872 CARD18P57730 90 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 COPZ1P61923 177 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 PON3Q15166 354 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 ZSWIM7Q19AV6 140 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 VMACQ2NL98 169 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 GLIPR1L2Q4G1C9 344 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 ZNF550Q7Z398 422 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 GCNT2Q8N0V5 402 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 LILRB4Q8NHJ6 448 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 FNDC9Q8TBE3 224 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 OR5B2Q96R09 309 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 TM9SF2Q99805 663 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 RSPO3Q9BXY4 272 aaPredicted RBP17.3■□□□□ 0.36
COPS7A-205ENST00000536872 ARL8BQ9NVJ2 186 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 CMTM6Q9NX76 183 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 GMPR2Q9P2T1 348 aaKnown RBP17.3■□□□□ 0.36
COPS7A-205ENST00000536872 CLCF1Q9UBD9 225 aa17.3■□□□□ 0.36
COPS7A-205ENST00000536872 A0A1W2PNR3 127 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 MBD3L4A6NDZ8 208 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 MBD3L3A6NE82 208 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 PRORSD1PA6NEY8 169 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 MBD3L5A6NJ08 208 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 GJE1A6NN92 205 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 SYNGR4O95473 234 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 TMIGD3P0DMS9 266 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 BMP5P22003 454 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 TACR3P29371 465 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 PRDX6P30041 224 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 PRKAR1BP31321 381 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 APOBEC1P41238 236 aaKnown RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 DMTNQ08495 405 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 FOXF2Q12947 444 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 SELENBP1Q13228 472 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 CTU2Q2VPK5 515 aaKnown RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 ESPNLQ6ZVH7 1005 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 GRINAQ7Z429 371 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 ADGRE4PQ86SQ3 457 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 CALHM3Q86XJ0 350 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 CCDC197Q8NCU1 140 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 MBD3L2Q8NHZ7 208 aaPredicted RBP17.29■□□□□ 0.36
COPS7A-205ENST00000536872 SLC26A7Q8TE54 656 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 ZNF583Q96ND8 569 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 KCNJ16Q9NPI9 418 aa17.29■□□□□ 0.36
COPS7A-205ENST00000536872 TMED7-TICAM2A0A0A6YYA0 188 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ADAMDEC1O15204 470 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 SHOX2O60902 331 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 GCM2O75603 506 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 MFN2O95140 757 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 CTSSP25774 331 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 GRNP28799 593 aaKnown RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 SLC1A3P43003 542 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 SLC7A2P52569 658 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ZNF136P52737 540 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 INTS11Q5TA45 600 aaKnown RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 DHRS4L2Q6PKH6 230 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 COMTD1Q86VU5 262 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ADGRG3Q86Y34 549 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 SLC30A8Q8IWU4 369 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 SLC15A3Q8IY34 581 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ROBO4Q8WZ75 1007 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 REXO5Q96IC2 774 aaKnown RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ADGRG7Q96K78 797 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 UCN2Q96RP3 112 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 HOPXQ9BPY8 73 aaPredicted RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 GPATCH1Q9BRR8 931 aaKnown RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 PRR14Q9BWN1 585 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 MCTS1Q9ULC4 181 aaKnown RBP17.28■□□□□ 0.36
COPS7A-205ENST00000536872 TMED7Q9Y3B3 224 aa17.28■□□□□ 0.36
COPS7A-205ENST00000536872 ETV2O00321 342 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-205ENST00000536872 AQP8O94778 261 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 RCBTB2O95199 551 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 HTR3AP46098 478 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 POLR2HP52434 150 aaKnown RBP17.27■□□□□ 0.36
COPS7A-205ENST00000536872 PCBP3P57721 371 aaKnown RBP17.27■□□□□ 0.36
COPS7A-205ENST00000536872 PSME3P61289 254 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 LIPEQ05469 1076 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 SP5Q6BEB4 398 aaPredicted RBP17.27■□□□□ 0.36
COPS7A-205ENST00000536872 WBP2NLQ6ICG8 309 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 C3orf33Q6P1S2 294 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 ARPINQ7Z6K5 226 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 PATL1Q86TB9 770 aaKnown RBP17.27■□□□□ 0.36
COPS7A-205ENST00000536872 ANKS4BQ8N8V4 417 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 CNEP1R1Q8N9A8 125 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 OR2T12Q8NG77 320 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 SRXN1Q9BYN0 137 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 OR11A1Q9GZK7 315 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 TIGARQ9NQ88 270 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 KLHL28Q9NXS3 571 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 CHRNA9Q9UGM1 479 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 TAGLN3Q9UI15 199 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 OSGIN1Q9UJX0 560 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 ZNF175Q9Y473 711 aa17.27■□□□□ 0.36
COPS7A-205ENST00000536872 PKDREJQ9NTG1 2253 aa17.27■□□□□ 0.35
COPS7A-205ENST00000536872 TMEM72A0PK05 275 aa17.26■□□□□ 0.35
COPS7A-205ENST00000536872 FAAHO00519 579 aa17.26■□□□□ 0.35
COPS7A-205ENST00000536872 DVL2O14641 736 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms