RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 OR5B2Q96R09 309 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 IKZF5Q9H5V7 419 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 C12orf49Q9H741 205 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 EXOSC3Q9NQT5 275 aaKnown RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 KLHL28Q9NXS3 571 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 ING1Q9UK53 422 aaPredicted RBP12.73□□□□□ -0.37
UBE3B-206ENST00000536398 EMC9Q9Y3B6 208 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 CHST2Q9Y4C5 530 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 TESMINQ9Y4I5 508 aa12.73□□□□□ -0.37
UBE3B-206ENST00000536398 DSPPQ9NZW4 1301 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 A0A1W2PPR1 153 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 SIAH2O43255 324 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 DBIP07108 87 aaKnown RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 IL7RP16871 459 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 NCF2P19878 526 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 DNAJA1P31689 397 aaKnown RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 MAGEA8P43361 318 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ATP4BP51164 291 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 SQLEQ14534 574 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 LRIF1Q5T3J3 769 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 C3orf33Q6P1S2 294 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 FCRLAQ7L513 359 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 PEX5LQ8IYB4 626 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 CLIP4Q8N3C7 705 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 TMEM234Q8WY98 164 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF775Q96BV0 537 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ARL5BQ96KC2 179 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 SLC39A3Q9BRY0 314 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 RSPO3Q9BXY4 272 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 KLHL4Q9C0H6 718 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 OR11A1Q9GZK7 315 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF385DQ9H6B1 395 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 TIGARQ9NQ88 270 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 ELOVL5Q9NYP7 299 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 VAPAQ9P0L0 249 aa12.72□□□□□ -0.37
UBE3B-206ENST00000536398 C6orf203Q9P0P8 240 aaPredicted RBP12.72□□□□□ -0.37
UBE3B-206ENST00000536398 A0A0G2JND7 137 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 C16orf97H3BN30 126 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 SMAD9O15198 467 aaKnown RBP12.71□□□□□ -0.37
UBE3B-206ENST00000536398 PRKD3O94806 890 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 APOBEC1P41238 236 aaKnown RBP12.71□□□□□ -0.37
UBE3B-206ENST00000536398 DIO1P49895 249 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 RAC3P60763 192 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 EPS8Q12929 822 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 SYT14P1Q58G82 188 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 TMPPEQ6ZT21 453 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 GRINAQ7Z429 371 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 CMIPQ8IY22 773 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 REXO5Q96IC2 774 aaKnown RBP12.71□□□□□ -0.37
UBE3B-206ENST00000536398 SERINC1Q9NRX5 453 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 GLRX2Q9NS18 164 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 NDRG3Q9UGV2 375 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 OSGIN1Q9UJX0 560 aa12.71□□□□□ -0.37
UBE3B-206ENST00000536398 ZNF443Q9Y2A4 671 aaPredicted RBP12.71□□□□□ -0.37
UBE3B-206ENST00000536398 AKAP6Q13023 2319 aa12.71□□□□□ -0.38
UBE3B-206ENST00000536398 HRNRQ86YZ3 2850 aaPredicted RBP12.71□□□□□ -0.38
UBE3B-206ENST00000536398 CCDC168Q8NDH2 2452 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 UQCRHLA0A096LP55 91 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TRBV5-3A0A0A0MS03 114 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TMED7-TICAM2A0A0A6YYA0 188 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 A0A0G2JPF8 293 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TMEM72A0PK05 275 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 CDHR4A6H8M9 788 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 CFAP73A6NFT4 308 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 HNRNPCL2B2RXH8 293 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 HNRNPCL3B7ZW38 293 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 HNRNPCL1O60812 293 aaKnown RBP12.7□□□□□ -0.38
UBE3B-206ENST00000536398 HRGP04196 525 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 FESP07332 822 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 HNRNPCL4P0DMR1 293 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TFPIP10646 304 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 BMP2P12643 396 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 PRG2P13727 222 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 EDNRAP25101 427 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TACR3P29371 465 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 ACAA2P42765 397 aaKnown RBP12.7□□□□□ -0.38
UBE3B-206ENST00000536398 CRISP3P54108 245 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 GNA13Q14344 377 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
UBE3B-206ENST00000536398 FBXW10Q5XX13 1052 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 GTF2IRD2BQ6EKJ0 949 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 DLEU7Q6UYE1 221 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 STAC2Q6ZMT1 411 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 GTF2IRD2Q86UP8 949 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 PMM1Q92871 262 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 ZC3HAV1LQ96H79 300 aaKnown RBP12.7□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF300Q96RE9 604 aaPredicted RBP12.7□□□□□ -0.38
UBE3B-206ENST00000536398 PSD2Q9BQI7 771 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 A4GALTQ9NPC4 353 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 CALML5Q9NZT1 146 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 KLHL13Q9P2N7 655 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 CHRNA9Q9UGM1 479 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 TMED7Q9Y3B3 224 aa12.7□□□□□ -0.38
UBE3B-206ENST00000536398 A0A1W2PP18 115 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 ZC3H12DA2A288 527 aaKnown RBP12.69□□□□□ -0.38
UBE3B-206ENST00000536398 ZNF814B7Z6K7 855 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 SULT2B1O00204 365 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 FRS3O43559 492 aa12.69□□□□□ -0.38
UBE3B-206ENST00000536398 THBDP07204 575 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms