RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 ZNF221Q9UK13 617 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 MRPS17Q9Y2R5 130 aaKnown RBP12.31□□□□□ -0.44
VPS33B-202ENST00000535906 OR10H1Q9Y4A9 318 aa12.31□□□□□ -0.44
VPS33B-202ENST00000535906 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 SMIM30A4D0T7 59 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 FITM1A5D6W6 292 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 RHPN2P1A8MT19 583 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 CASKO14936 926 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 KRT8P05787 483 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 GSTT2P0CG29 244 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 GSTT2BP0CG30 244 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 NR4A2P43354 598 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 PPP3R1P63098 170 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 RPL13AP3Q6NVV1 102 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 TMEM53Q6P2H8 277 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 KIRREL2Q6UWL6 708 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 LINC00114Q6XXX2 140 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 OAFQ86UD1 273 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 ZSCAN1Q8NBB4 408 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 SLC37A3Q8NCC5 494 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 KISS1RQ969F8 398 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF486Q96H40 463 aaPredicted RBP12.3□□□□□ -0.44
VPS33B-202ENST00000535906 TNFRSF13CQ96RJ3 184 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 G6PC3Q9BUM1 346 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 PRO3102Q9H379 93 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 EVA1AQ9H8M9 152 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 TMEM165Q9HC07 324 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 RBMX2Q9Y388 322 aaKnown RBP12.3□□□□□ -0.44
VPS33B-202ENST00000535906 RNF215Q9Y6U7 377 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 CACNA1IQ9P0X4 2223 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 H0YIG0 161 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 GNB5O14775 395 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 CELP19835 753 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 RPS5P46782 204 aaKnown RBP12.3□□□□□ -0.44
VPS33B-202ENST00000535906 CAV3P56539 151 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 KLHL12Q53G59 568 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 GATAD2AQ86YP4 633 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 ZDHHC12Q96GR4 267 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 TIMP4Q99727 224 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 TMED9Q9BVK6 235 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 PCED1AQ9H1Q7 454 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 ISG20L2Q9H9L3 353 aaKnown RBP12.3□□□□□ -0.44
VPS33B-202ENST00000535906 EPHA6Q9UF33 1036 aa12.3□□□□□ -0.44
VPS33B-202ENST00000535906 LINC00854A0A1B0GVQ3 168 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 FAM86C2PA6NEL3 165 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 C12orf71A8MTZ7 269 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 H3BMH7 237 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 HCN1O60741 890 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PIAS2O75928 621 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 CLUP10909 449 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 IL9P15248 144 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 BCKDHBP21953 392 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PAICSP22234 425 aaKnown RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 NOS3P29474 1203 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 OR1D4P47884 311 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 OR1D5P58170 312 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 STARD6P59095 220 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 CRYZQ08257 329 aaKnown RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 INSL4Q14641 139 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 GRM7Q14831 915 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PYDC2Q56P42 97 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PRAMEF17Q5VTA0 474 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 VASNQ6EMK4 673 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF322Q6U7Q0 402 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 TTLL10Q6ZVT0 673 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 TMEM99Q8N816 258 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF321PQ8N8H1 164 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF578Q96N58 590 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 TBX5Q99593 518 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 HDHD5Q9BXW7 423 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 RAB33BQ9H082 229 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 TBC1D17Q9HA65 648 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 MCCC2Q9HCC0 563 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 LANCL2Q9NS86 450 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ASB6Q9NWX5 421 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 FBXL4Q9UKA2 621 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 POLHQ9Y253 713 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 MEIOCA2RUB1 952 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 C17orf105B2RV13 164 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 GABRPO00591 440 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 REM1O75628 298 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PPP1R3DO95685 299 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 CSTAP01040 98 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ALAS2P22557 587 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 RBM34P42696 430 aaKnown RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 DAB2P98082 770 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ATAD3CQ5T2N8 411 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ULK3Q6PHR2 472 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ZNF550Q7Z398 422 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 KLBQ86Z14 1044 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 ACBD7Q8N6N7 88 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 CYB561A3Q8NBI2 242 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 PTPMT1Q8WUK0 201 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 DNAJA4Q8WW22 397 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 CLIP3Q96DZ5 547 aa12.29□□□□□ -0.44
VPS33B-202ENST00000535906 SENP5Q96HI0 755 aaPredicted RBP12.29□□□□□ -0.44
VPS33B-202ENST00000535906 TEAD3Q99594 435 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms