RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 DPH5Q9H2P9 285 aa6.78□□□□□ -1.32
NXF1-215ENST00000533440 MRPL46Q9H2W6 279 aaKnown RBP6.78□□□□□ -1.32
NXF1-215ENST00000533440 FBXO9Q9UK97 447 aaPredicted RBP6.78□□□□□ -1.32
NXF1-215ENST00000533440 ZNF281Q9Y2X9 895 aa6.78□□□□□ -1.32
NXF1-215ENST00000533440 PCDHB14Q9Y5E9 798 aa6.78□□□□□ -1.32
NXF1-215ENST00000533440 PCDHGB1Q9Y5G3 927 aa6.78□□□□□ -1.32
NXF1-215ENST00000533440 IGHV1-18A0A0C4DH31 117 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 FAM187AA6NFU0 413 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 NPIPB9F8W1W9 429 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 H3BNH8 94 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 SULT2B1O00204 365 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 PDPK1O15530 556 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 EIF4E2O60573 245 aaKnown RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 MRPL33O75394 65 aaKnown RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 SUPT7LO94864 414 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 WNT11O96014 354 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 ENO1P06733 434 aaKnown RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 IGFBP1P08833 259 aaPredicted RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 ALOX5P09917 674 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 OR4A8P0C604 315 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 GPC1P35052 558 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 FRKP42685 505 aaPredicted RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 PRPS1P60891 318 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 CSNK2A1P68400 391 aaPredicted RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 POU6F2P78424 691 aaPredicted RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 MRPS25P82663 173 aaKnown RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 CCNIQ14094 377 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 QPRTQ15274 297 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 NDUFAF6Q330K2 333 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 TIGD2Q4W5G0 525 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 ZNF678Q5SXM1 525 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 GPRIN3Q6ZVF9 776 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 SPATA19Q7Z5L4 167 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 SVOPLQ8N434 492 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 OR5W2Q8NH69 310 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 WDR60Q8WVS4 1066 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 TMEM186Q96B77 213 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 ARL8AQ96BM9 186 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 EGLN2Q96KS0 407 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 STACQ99469 402 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 DOK1Q99704 481 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 KATNB1Q9BVA0 655 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 QRSL1Q9H0R6 528 aaKnown RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 PIGUQ9H490 435 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 DUSP22Q9NRW4 184 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 SLC7A10Q9NS82 523 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 HIF1ANQ9NWT6 349 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 GIN1Q9NXP7 522 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 USP22Q9UPT9 525 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 POLR3HQ9Y535 204 aaPredicted RBP6.77□□□□□ -1.33
NXF1-215ENST00000533440 TIMM22Q9Y584 194 aa6.77□□□□□ -1.33
NXF1-215ENST00000533440 TMEM129A0AVI4 362 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 NPIPB8E9PQR5 432 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 GTPBP1O00178 669 aaKnown RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ZNF264O43296 627 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 DNPH1O43598 174 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 TBX19O60806 448 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 PMS2P2O95744 297 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 IFNGR1P15260 489 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 EPHA1P21709 976 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 MPGP29372 298 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 RNF144AP50876 292 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ATP12AP54707 1039 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 PLTPP55058 493 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 PKNOX1P55347 436 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 TGFBR3Q03167 851 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 CBFBQ13951 182 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 UAP1Q16222 522 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 MIDNQ504T8 468 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 ZNF385BQ569K4 471 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 SYT14P1Q58G82 188 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 SPDYAQ5MJ70 313 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 TSPO2Q5TGU0 170 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 C9orf135Q5VTT2 229 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 NOXRED1Q6NXP6 359 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 C1orf229Q6ZS94 237 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ZCCHC24Q8N2G6 241 aaKnown RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ZDHHC22Q8N966 263 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 ZFP28Q8NHY6 868 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 PIGXQ8TBF5 258 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 FBXO25Q8TCJ0 367 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 UBASH3BQ8TF42 649 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 SLC25A43Q8WUT9 341 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ST8SIA1Q92185 356 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 CDS1Q92903 461 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 CIDECQ96AQ7 238 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 OTUB1Q96FW1 271 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 TMEM237Q96Q45 408 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 SLC38A2Q96QD8 506 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 KCNA7Q96RP8 456 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 IQCGQ9H095 443 aaKnown RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 RACGAP1Q9H0H5 632 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 OBP2BQ9NPH6 170 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 ESM1Q9NQ30 184 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 SERINC1Q9NRX5 453 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 ACSS1Q9NUB1 689 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 ARMCX1Q9P291 453 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 CRNNQ9UBG3 495 aaPredicted RBP6.76□□□□□ -1.33
NXF1-215ENST00000533440 UPB1Q9UBR1 384 aa6.76□□□□□ -1.33
NXF1-215ENST00000533440 GRIP1Q9Y3R0 1128 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms