RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 POLR2J3Q9H1A7 115 aaKnown RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 MAGED1Q9Y5V3 778 aaPredicted RBP17.27■□□□□ 0.36
SMPD1-205ENST00000531303 PKD1L2Q7Z442 2459 aa17.27■□□□□ 0.36
SMPD1-205ENST00000531303 ELOA3DA6NLF2 546 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-205ENST00000531303 TRIP10Q15642 601 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 ELOA3BQ3SY89 546 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 PLEKHN1Q494U1 663 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-205ENST00000531303 NADK2Q4G0N4 442 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 DCST1Q5T197 706 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 GRINAQ7Z429 371 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 TMEM251Q8N6I4 163 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 ZFP62Q8NB50 900 aaPredicted RBP17.26■□□□□ 0.35
SMPD1-205ENST00000531303 ELOA3Q8NG57 546 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 OR14L1PQ8NHC6 308 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 TMEM255BQ8WV15 326 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 DHRS1Q96LJ7 313 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 ALPK1Q96QP1 1244 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 BARD1Q99728 777 aaKnown RBP17.26■□□□□ 0.35
SMPD1-205ENST00000531303 ADAM19Q9H013 955 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 OSGIN1Q9UJX0 560 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 TMCC3Q9ULS5 477 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 B3GNT3Q9Y2A9 372 aa17.26■□□□□ 0.35
SMPD1-205ENST00000531303 A0A087WZY1 265 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 TMED7-TICAM2A0A0A6YYA0 188 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 A0A1W2PRQ8 180 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 CHP2O43745 196 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 ZIC3O60481 467 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 GLSO94925 669 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 CELA3AP09093 270 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 CXCR1P25024 350 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 SRD5A2P31213 254 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 DNAJA1P31689 397 aaKnown RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 MAGEA5P43359 124 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 POLR2HP52434 150 aaKnown RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 LSM11P83369 360 aaKnown RBP eCLIP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 FOXK2Q01167 660 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 DGCR6Q14129 220 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 SEC23BQ15437 767 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 LRRC36Q1X8D7 754 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 RAET1LQ5VY80 246 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 LPCAT4Q643R3 524 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 ATG4DQ86TL0 474 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 FAM83FQ8NEG4 500 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 OR4C15Q8NGM1 316 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 POC1BQ8TC44 478 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 SLC7A13Q8TCU3 470 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 SLC38A4Q969I6 547 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 EPYCQ99645 322 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 CIB1Q99828 191 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 PRSS27Q9BQR3 290 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 UBQLN3Q9H347 655 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 ZNF703Q9H7S9 590 aaPredicted RBP17.25■□□□□ 0.35
SMPD1-205ENST00000531303 OAZ3Q9UMX2 235 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 TMED7Q9Y3B3 224 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 PCDHGB6Q9Y5F9 930 aa17.25■□□□□ 0.35
SMPD1-205ENST00000531303 PDLIM1O00151 329 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 KPNA4O00629 521 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ZZEF1O43149 2961 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 RASAL1O95294 804 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 OPN1LWP04000 364 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 THRBP10828 461 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 PNMTP11086 282 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 IL11P20809 199 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 FPR1P21462 350 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 PRKACGP22612 351 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 RNFT1Q5M7Z0 435 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 WIPI1Q5MNZ9 446 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 OTUD3Q5T2D3 398 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ZNF730Q6ZMV8 503 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 STK32CQ86UX6 486 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 SLC22A16Q86VW1 577 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 MEX3DQ86XN8 651 aaKnown RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 EXD3Q8N9H8 876 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 OR5K1Q8NHB7 308 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 DNAJA3Q96EY1 480 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 MRGPRX4Q96LA9 322 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 UBL7Q96S82 380 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 DEFB127Q9H1M4 99 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 TSPAN10Q9H1Z9 355 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ADNPQ9H2P0 1102 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 PDP1Q9P0J1 537 aaPredicted RBP17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ZNF407Q9C0G0 2248 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 A0A087WUJ7 227 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 G3V2T6 193 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ACOT7O00154 380 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 PIP5K1CO60331 668 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 CCNB2O95067 398 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 HTR3AP46098 478 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ARHGDIAP52565 204 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 HMGA2P52926 109 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ST3GAL2Q16842 350 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 SLC6A19Q695T7 634 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 RRM2BQ7LG56 351 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ADGRG3Q86Y34 549 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 GIPC3Q8TF64 312 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 EME1Q96AY2 570 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 ZBTB8AQ96BR9 441 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 TMEM185BQ9H7F4 350 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 LHX6Q9UPM6 363 aa17.24■□□□□ 0.35
SMPD1-205ENST00000531303 DNAJC13O75165 2243 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms