RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 TRAF4Q9BUZ4 470 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 MRPL1Q9BYD6 325 aaKnown RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 FRMD8P1Q9BZ68 369 aaPredicted RBP6.01□□□□□ -1.45
CSDE1-213ENST00000530784 P2RY12Q9H244 342 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 KCNK15Q9H427 330 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 ACKR4Q9NPB9 350 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 C14orf105Q9NVL8 296 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 TRPC4Q9UBN4 977 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF148Q9UQR1 794 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 KLK4Q9Y5K2 254 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 DOPEY1Q5JWR5 2465 aa6.01□□□□□ -1.45
CSDE1-213ENST00000530784 PCM1Q15154 2024 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 IGHV1-45A0A0A0MS14 117 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 IGLV9-49A0A0B4J1Y8 123 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 TRGV8A0A0C4DH27 118 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 A0A1W2PPV9 198 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 A0A1W2PQ72 361 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 KRT87PA6NCN2 255 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 H0YGG7 62 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ANXA5P08758 320 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 VPREB1P12018 145 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 RPS3P23396 243 aaKnown RBP eCLIP6□□□□□ -1.453e-17■□□□□ 9.2
CSDE1-213ENST00000530784 RPA3P35244 121 aaPredicted RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 TDGF1P3P51864 188 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 EMP2P54851 167 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 KCNK10P57789 538 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 KRTAP10-12P60413 245 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 SIRPAP78324 504 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 KCNJ10P78508 379 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 LGALS3BPQ08380 585 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ART3Q13508 389 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ZFP69Q49AA0 526 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 GTDC1Q4AE62 458 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 SEL1L2Q5TEA6 688 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 DHRS7BQ6IAN0 325 aaPredicted RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 TMEM207Q6UWW9 146 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 CPSF7Q8N684 471 aaKnown RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 CSNK1A1LQ8N752 337 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF383Q8NA42 475 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 PSMF1Q92530 271 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 MTERF3Q96E29 417 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ART5Q96L15 291 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 SGK494Q96LW2 274 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 TAAR6Q96RI8 345 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 DPH7Q9BTV6 452 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ACAT2Q9BWD1 397 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 MMP27Q9H306 513 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 MRPS30Q9NP92 439 aaKnown RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 CHRAC1Q9NRG0 131 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 FAM114A2Q9NRY5 505 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 UTP6Q9NYH9 597 aaKnown RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 MRPL15Q9P015 296 aaKnown RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 PAK5Q9P286 719 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 STOX2Q9P2F5 926 aaPredicted RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 MRPS2Q9Y399 296 aaKnown RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 PYGO1Q9Y3Y4 419 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 KLF2Q9Y5W3 355 aaPredicted RBP6□□□□□ -1.45
CSDE1-213ENST00000530784 NUP210LQ5VU65 1888 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 ICE1Q9Y2F5 2266 aa6□□□□□ -1.45
CSDE1-213ENST00000530784 OR5H15A6NDH6 313 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 H3BMM5 538 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 AP3B1O00203 1094 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 CCL21O00585 134 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PFDN6O15212 129 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 SSX4O60224 188 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 NIPSNAP2O75323 286 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TBX6O95947 436 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 F10P00742 488 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TPOP07202 933 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 HEXBP07686 556 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ERGP11308 486 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ICAM2P13598 275 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ETS1P14921 441 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 EZRP15311 586 aaKnown RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ATP5DP30049 168 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PTGER4P35408 488 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ZNF75DP51815 510 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 KRTAP10-5P60370 271 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 CRADDP78560 199 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 RBPJQ06330 500 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TSTA3Q13630 321 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 FASTKQ14296 549 aaKnown RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 HKDC1Q2TB90 917 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ANKRD20A4Q4UJ75 823 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 CTSL3PQ5NE16 218 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 GRTP1Q5TC63 336 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 GARNL3Q5VVW2 1013 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 SUSD1Q6UWL2 747 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ADCK2Q7Z695 626 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PRUNE1Q86TP1 453 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 PAQR7Q86WK9 346 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 AMER3Q8N944 861 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 OR9A1PQ8NGU1 263 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ZFAND2BQ8WV99 257 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 C1orf54Q8WWF1 131 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 ITLN2Q8WWU7 325 aaPredicted RBP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 SMPDL3AQ92484 453 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 HSD17B8Q92506 261 aa5.99□□□□□ -1.45
CSDE1-213ENST00000530784 TAF15Q92804 592 aaKnown RBP eCLIP5.99□□□□□ -1.45
CSDE1-213ENST00000530784 HAS2Q92819 552 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms