RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 PHF10Q8WUB8 498 aaKnown RBP12.4□□□□□ -0.42
CD44-224ENST00000526669 ZBTB8AQ96BR9 441 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 GPR137Q96N19 417 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 PIGQQ9BRB3 760 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 UGT2B28Q9BY64 529 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 OSGIN1Q9UJX0 560 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 TMED7Q9Y3B3 224 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 ZNF337Q9Y3M9 751 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 ENPP4Q9Y6X5 453 aa12.4□□□□□ -0.42
CD44-224ENST00000526669 CFAP46Q8IYW2 2715 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 A0A0B4J2E0 115 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 A0A1B0GTH9 108 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 A0A1B0GX12 115 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 TMEM72A0PK05 275 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 EFNA2O43921 213 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 FMO6PO60774 539 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 IGHG3P01860 377 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 THY1P04216 161 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 BMP7P18075 431 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 PSMA4P25789 261 aaKnown RBP12.39□□□□□ -0.43
CD44-224ENST00000526669 SHC1P29353 583 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SFTPDP35247 375 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SLC1A3P43003 542 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 POLR2HP52434 150 aaKnown RBP12.39□□□□□ -0.43
CD44-224ENST00000526669 CDH12P55289 794 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 TMEM44Q2T9K0 475 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SLC25A53Q5H9E4 307 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 ALG10BQ5I7T1 473 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 GDF7Q7Z4P5 450 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 P3H2Q8IVL5 708 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 UBQLNLQ8IYU4 475 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SLCO4A1Q96BD0 722 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SLC41A3Q96GZ6 507 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 MRGPRX4Q96LA9 322 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 ZNF300Q96RE9 604 aaPredicted RBP12.39□□□□□ -0.43
CD44-224ENST00000526669 ADAM19Q9H013 955 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 DENND2DQ9H6A0 471 aaPredicted RBP12.39□□□□□ -0.43
CD44-224ENST00000526669 ACKR4Q9NPB9 350 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 AGPAT4Q9NRZ5 378 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SELENONQ9NZV5 590 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 NDUFAF4Q9P032 175 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 SLC7A7Q9UM01 511 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 A4GNTQ9UNA3 340 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 MRPS18CQ9Y3D5 142 aaKnown RBP12.39□□□□□ -0.43
CD44-224ENST00000526669 TESMINQ9Y4I5 508 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 HIVEP3Q5T1R4 2406 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 FREM1Q5H8C1 2179 aa12.39□□□□□ -0.43
CD44-224ENST00000526669 POLEQ07864 2286 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 TRAPPC13A5PLN9 417 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ELOA3DA6NLF2 546 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 NPIPA2E9PIF3 369 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 NPIPA3F8WFD2 350 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 H0YC42 278 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 FFAR1O14842 300 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 SEC14L5O43304 696 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 SUSD5O60279 629 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 FKBP6O75344 327 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 C1QL1O75973 258 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 LYPD3O95274 346 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 GPIP06744 558 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 UMPSP11172 480 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ZNF17P17021 662 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 POU3F2P20265 443 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 CXCR1P25024 350 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 EIF1P41567 113 aaKnown RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 TPD52P55327 224 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 GFRA1P56159 465 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 SPIBQ01892 262 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 SRYQ05066 204 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ELOA3BQ3SY89 546 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 GLYR1Q49A26 553 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 IQCCQ4KMZ1 466 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 WDR88Q6ZMY6 472 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 PRICKLE2Q7Z3G6 844 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 FGD2Q7Z6J4 655 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ATG4DQ86TL0 474 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 CYP4Z1Q86W10 505 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ADGRG3Q86Y34 549 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 NKAIN4Q8IVV8 208 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 GHDCQ8N2G8 530 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 LSMEM1Q8N8F7 131 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ELOA3Q8NG57 546 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 PYDC1Q8WXC3 89 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 ABTB1Q969K4 478 aaPredicted RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 SLX1AQ9BQ83 275 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 OR11A1Q9GZK7 315 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 MAGIXQ9H6Y5 334 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 RIMS3Q9UJD0 308 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 CAMK2AQ9UQM7 478 aa12.38□□□□□ -0.43
CD44-224ENST00000526669 FAM32AQ9Y421 112 aaKnown RBP12.38□□□□□ -0.43
CD44-224ENST00000526669 A0A1W2PNR3 127 aa12.37□□□□□ -0.43
CD44-224ENST00000526669 ZC3H12DA2A288 527 aaKnown RBP12.37□□□□□ -0.43
CD44-224ENST00000526669 C7orf72A4D263 438 aa12.37□□□□□ -0.43
CD44-224ENST00000526669 EIF4E1BA6NMX2 242 aaKnown RBP12.37□□□□□ -0.43
CD44-224ENST00000526669 ETV2O00321 342 aaPredicted RBP12.37□□□□□ -0.43
CD44-224ENST00000526669 HCN1O60741 890 aa12.37□□□□□ -0.43
CD44-224ENST00000526669 TIPRLO75663 272 aa12.37□□□□□ -0.43
CD44-224ENST00000526669 PRSS23O95084 383 aa12.37□□□□□ -0.43
CD44-224ENST00000526669 OR5F1O95221 314 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms