RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KLHL38Q2WGJ6 581 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 NHLRC3Q5JS37 347 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 RNASEKQ6P5S7 137 aaKnown RBP3.56□□□□□ -1.84
CSDE1-211ENST00000525970 CLEC2AQ6UVW9 174 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 ENPP6Q6UWR7 440 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 TMEM107Q6UX40 140 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 PSTKQ8IV42 348 aaKnown RBP3.56□□□□□ -1.84
CSDE1-211ENST00000525970 C9orf40Q8IXQ3 194 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 ABHD12Q8N2K0 398 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 Q8N377 158 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 GTPBP8Q8N3Z3 284 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-211ENST00000525970 CSNK1A1LQ8N752 337 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 SDR9C7Q8NEX9 313 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 CCDC148Q8NFR7 591 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 OR4Q3Q8NH05 313 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 CYP2S1Q96SQ9 504 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 CHP1Q99653 195 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 MCHR1Q99705 422 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 RBM4BQ9BQ04 359 aaKnown RBP3.56□□□□□ -1.84
CSDE1-211ENST00000525970 SMYD3Q9H7B4 428 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 NIPAL2Q9H841 368 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 NEK6Q9HC98 313 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 PAK1IP1Q9NWT1 392 aaPredicted RBP3.56□□□□□ -1.84
CSDE1-211ENST00000525970 IMPAD1Q9NX62 359 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 SLC2A6Q9UGQ3 507 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 SLC7A8Q9UHI5 535 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 KIAA1257Q9ULG3 409 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 PDE10AQ9Y233 779 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 GON4LQ3T8J9 2241 aa3.56□□□□□ -1.84
CSDE1-211ENST00000525970 NCF1BA6NI72 391 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 NCF1CA8MVU1 366 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 ZNF705EA8MWA4 302 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 B4DXG7 233 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 G3V3Y1 287 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 BOLA2-SMG1P6H3BVE0 249 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 FCN1O00602 326 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 CDX4O14627 284 aaPredicted RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 RNF13O43567 381 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PRKYO43930 277 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PFKFB2O60825 505 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 SLC2A10O95528 541 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 LAMP1P11279 417 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 IDSP22304 550 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 NMT1P30419 496 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 OXTRP30559 389 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 CASP14P31944 242 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PTGDSP41222 190 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 GYG1P46976 350 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PRKXP51817 358 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 EFNA3P52797 238 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 CAVIN4Q5BKX8 364 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 SPANXN2Q5MJ10 180 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 BZW1Q7L1Q6 419 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 KRTAP7-1Q8IUC3 87 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 SVOPLQ8N434 492 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 OR1L6Q8NGR2 347 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 TSEN15Q8WW01 171 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 ELMO1Q92556 727 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 MRPS31Q92665 395 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 TIMD4Q96H15 378 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 LINC00479Q96M42 142 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 ZNF599Q96NL3 588 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 IL4I1Q96RQ9 567 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 CCT8L2Q96SF2 557 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 MCRIP2Q9BUT9 160 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 RAB34Q9BZG1 259 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 NAT10Q9H0A0 1025 aaKnown RBP3.55□□□□□ -1.84
CSDE1-211ENST00000525970 ANKRA2Q9H9E1 313 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 NT5MQ9NPB1 228 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 KLHL28Q9NXS3 571 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 SPRR3Q9UBC9 169 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PRODH2Q9UF12 536 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 MUTYHQ9UIF7 546 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 ABCG2Q9UNQ0 655 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
CSDE1-211ENST00000525970 A0A1B0GTH9 108 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 A0A1B0GU03 582 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 A0A1B0GVY2 172 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 A0A1B0GWB2 263 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 TRDCB7Z8K6 153 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 E9PLD3 99 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 POLR2DO15514 142 aaKnown RBP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 OR10H3O60404 316 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 ATP5LO75964 103 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 GJB5O95377 273 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 TBX6O95947 436 aaPredicted RBP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 CT62P0C5K7 136 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 TRIM49P0CI25 452 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 TRIM49CP0CI26 452 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 TROVE2P10155 538 aaKnown RBP eCLIP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 COX5AP20674 150 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 KITLGP21583 273 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 IGHV1-2P23083 117 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 HMGB2P26583 209 aaKnown RBP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 GNA11P29992 359 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 SSR1P43307 286 aaKnown RBP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 DAP3P51398 398 aaKnown RBP3.54□□□□□ -1.84
CSDE1-211ENST00000525970 SLC8A3P57103 927 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 PAX8Q06710 450 aa3.54□□□□□ -1.84
CSDE1-211ENST00000525970 PPIL2Q13356 520 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms