RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 NXT1Q9UKK6 140 aaKnown RBP24.68■■□□□ 1.54
COL13A1-212ENST00000520133 MPDZO75970 2070 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 GNB5O14775 395 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 MYL12BO14950 172 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 NDUFB5O43674 189 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 MYL12AP19105 171 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 C1DQ13901 141 aaKnown RBP24.68■■□□□ 1.54
COL13A1-212ENST00000520133 NUBPLQ8TB37 319 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 WDR54Q9H977 334 aa24.68■■□□□ 1.54
COL13A1-212ENST00000520133 GPN3Q9UHW5 284 aaPredicted RBP24.68■■□□□ 1.54
COL13A1-212ENST00000520133 OR6C70A6NIJ9 312 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 EIF4E2O60573 245 aaKnown RBP24.67■■□□□ 1.54
COL13A1-212ENST00000520133 SLC6A6P31641 620 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 SLC9A3P48764 834 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 RGS6P49758 472 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 LSM3P62310 102 aaKnown RBP24.67■■□□□ 1.54
COL13A1-212ENST00000520133 C3orf38Q5JPI3 329 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 DESI1Q6ICB0 168 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 THSD4Q6ZMP0 1018 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 CXXC5Q7LFL8 322 aaKnown RBP24.67■■□□□ 1.54
COL13A1-212ENST00000520133 CACTIN-AS1Q8N1I8 211 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 NANOGP1Q8N7R0 232 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 ZNF563Q8TA94 476 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 ENKD1Q9H0I2 346 aa24.67■■□□□ 1.54
COL13A1-212ENST00000520133 M0R3G1 203 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 HCRTR2O43614 444 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 AIREO43918 545 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 SLC2A10O95528 541 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 VBP1P61758 197 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 SPHARQ15513 63 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 LCN10Q6JVE6 187 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 TMEM205Q6UW68 189 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 GID4Q8IVV7 300 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 LRFN5Q96NI6 719 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 TNFRSF13CQ96RJ3 184 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 CMC2Q9NRP2 79 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 CLEC2DQ9UHP7 191 aa24.66■■□□□ 1.54
COL13A1-212ENST00000520133 LSM2Q9Y333 95 aaKnown RBP24.66■■□□□ 1.54
COL13A1-212ENST00000520133 CCL4P13236 92 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 HTR1FP30939 366 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 CLK1P49759 484 aaKnown RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 FOXK2Q01167 660 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 ZNF117Q03924 483 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 ATG4DQ86TL0 474 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 LSRQ86X29 649 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 CPOQ8IVL8 374 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 HINT3Q9NQE9 182 aaKnown RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 AKAP7Q9P0M2 348 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 NPFFR2Q9Y5X5 522 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 LNP1A1A4G5 178 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 CSO75390 466 aaKnown RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 IGF2P01344 180 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 SLC1A3P43003 542 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 GAS1P54826 345 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 EFR3AQ14156 821 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 MARCH3Q86UD3 253 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 OR5L2Q8NGL0 311 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 OR8K3Q8NH51 312 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 SH3YL1Q96HL8 342 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 WDR77Q9BQA1 342 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 TMEM43Q9BTV4 400 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 C12orf10Q9HB07 376 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 ZBTB20Q9HC78 741 aaPredicted RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 MCCC2Q9HCC0 563 aa24.65■■□□□ 1.54
COL13A1-212ENST00000520133 EXOSC1Q9Y3B2 195 aaKnown RBP24.65■■□□□ 1.54
COL13A1-212ENST00000520133 EXPH5Q8NEV8 1989 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 CCRL2O00421 344 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 GDF9O60383 454 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 ZNF28P17035 718 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 PLA2G2CQ5R387 149 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 SLC35F1Q5T1Q4 408 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 RPL3LQ92901 407 aaKnown RBP24.64■■□□□ 1.54
COL13A1-212ENST00000520133 OTULINQ96BN8 352 aa24.64■■□□□ 1.54
COL13A1-212ENST00000520133 KIF26BQ2KJY2 2108 aa24.64■■□□□ 1.53
COL13A1-212ENST00000520133 TRBV11-1A0A0K0K1C0 115 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 LOC105378220A0A1B0GUY1 285 aaPredicted RBP24.63■■□□□ 1.53
COL13A1-212ENST00000520133 NDUFB2O95178 105 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 GADD45AP24522 165 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 EVI2BP34910 448 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 TSTQ16762 297 aaKnown RBP24.63■■□□□ 1.53
COL13A1-212ENST00000520133 TIMM50Q3ZCQ8 353 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 MESP1Q9BRJ9 268 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 RTN4RQ9BZR6 473 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 ZNF337Q9Y3M9 751 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 RIIAD1A6NNX1 92 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 FADS1O60427 444 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 SCG5P05408 212 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 PEPDP12955 493 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 ITPKBP27987 946 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 NOS3P29474 1203 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 CCKBRP32239 447 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 NCS1P62166 190 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 KHDRBS1Q07666 443 aaKnown RBP eCLIP24.63■■□□□ 1.53
COL13A1-212ENST00000520133 PLBD1Q6P4A8 553 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 ARHGAP11AQ6P4F7 1023 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 MR1Q95460 341 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 CMKLR1Q99788 373 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 TAPBPLQ9BX59 468 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 ULBP3Q9BZM4 244 aa24.63■■□□□ 1.53
COL13A1-212ENST00000520133 SLC39A1Q9NY26 324 aa24.63■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms