RNA–Protein interactions for RNA: ENST00000515180.5

CDK7-212, Transcript of cyclin dependent kinase 7, humanhuman

TSL 3

Gene CDK7, Length 486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7-212ENST00000515180 PAGE3Q5JUK9 113 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 TMEM201Q5SNT2 666 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 MRPL2Q5T653 305 aaKnown RBP11.64□□□□□ -0.55
CDK7-212ENST00000515180 GTF2IRD2BQ6EKJ0 949 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 C3orf33Q6P1S2 294 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 BLOC1S3Q6QNY0 202 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 ZNF836Q6ZNA1 936 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 MSANTD1Q6ZTZ1 278 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
CDK7-212ENST00000515180 GTF2IRD2Q86UP8 949 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 ADGRG3Q86Y34 549 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 OR52P1PQ8NH57 321 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 SLC38A5Q8WUX1 472 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 OIT3Q8WWZ8 545 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 ARL5BQ96KC2 179 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 MAGEB18Q96M61 343 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 MED18Q9BUE0 208 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 CCDC106Q9BWC9 280 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 OR11A1Q9GZK7 315 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 SERINC1Q9NRX5 453 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 GLRX2Q9NS18 164 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 SLC25A37Q9NYZ2 338 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 P2RX2Q9UBL9 471 aa11.64□□□□□ -0.55
CDK7-212ENST00000515180 CSMD1Q96PZ7 3565 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 DEFB108AA8MXU0 73 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 CLIC1O00299 241 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 SMAD9O15198 467 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 DBIP07108 87 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 PABPC4LP0CB38 370 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 GKN3PP0CG01 181 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 HOXB9P17482 250 aaPredicted RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 MRPL19P49406 292 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 DIO1P49895 249 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 RAC3P60763 192 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 TXNL4AP83876 142 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 RGNQ15493 299 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 AGKQ53H12 422 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 SYT14P1Q58G82 188 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 STAC2Q6ZMT1 411 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 TMPPEQ6ZT21 453 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 GRINAQ7Z429 371 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 MSRB3Q8IXL7 192 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 PEX5LQ8IYB4 626 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 C10orf111Q8N326 155 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 MAL2Q969L2 176 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 SPDL1Q96EA4 605 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 PIK3IP1Q96FE7 263 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 TMEM19Q96HH6 336 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 ZNF300Q96RE9 604 aaPredicted RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 PLEKHF2Q9H8W4 249 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 SLC52A3Q9NQ40 469 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 EXOSC3Q9NQT5 275 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 KLHL13Q9P2N7 655 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 DCTN4Q9UJW0 460 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 ING1Q9UK53 422 aaPredicted RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 ANKRD17O75179 2603 aaKnown RBP11.63□□□□□ -0.55
CDK7-212ENST00000515180 CCDC168Q8NDH2 2452 aa11.63□□□□□ -0.55
CDK7-212ENST00000515180 ABCA4P78363 2273 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 A0A096LPI6 279 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 TMEM72A0PK05 275 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 SULT2B1O00204 365 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 THBDP07204 575 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 FESP07332 822 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 EDNRAP25101 427 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 TACR3P29371 465 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
CDK7-212ENST00000515180 PCYT1AP49585 367 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 RASGEF1BQ0VAM2 473 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 EPS8Q12929 822 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 RNPS1Q15287 305 aaKnown RBP11.62□□□□□ -0.55
CDK7-212ENST00000515180 TFAP2EQ6VUC0 442 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 CMIPQ8IY22 773 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 CLIP4Q8N3C7 705 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 HS3ST6Q96QI5 342 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 PSD2Q9BQI7 771 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 CHRNA9Q9UGM1 479 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 PRSS50Q9UI38 385 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 OSGIN1Q9UJX0 560 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 FREM1Q5H8C1 2179 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 CSMD2Q7Z408 3487 aa11.62□□□□□ -0.55
CDK7-212ENST00000515180 DSPPQ9NZW4 1301 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 PRRC2AP48634 2157 aaKnown RBP11.61□□□□□ -0.55
CDK7-212ENST00000515180 TMED7-TICAM2A0A0A6YYA0 188 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 CFAP73A6NFT4 308 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 ZNF814B7Z6K7 855 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 CYTIPO60759 359 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 RAMP1O60894 148 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 YES1P07947 543 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 PRG2P13727 222 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 NCF2P19878 526 aaPredicted RBP11.61□□□□□ -0.55
CDK7-212ENST00000515180 CRYGSP22914 178 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 DNASE1P24855 282 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 ACAA2P42765 397 aaKnown RBP11.61□□□□□ -0.55
CDK7-212ENST00000515180 CRISP3P54108 245 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDK7-212ENST00000515180 GNA13Q14344 377 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 LRIF1Q5T3J3 769 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 ALKBH2Q6NS38 261 aa11.61□□□□□ -0.55
CDK7-212ENST00000515180 PAMR1Q6UXH9 720 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms