RNA–Protein interactions for RNA: ENST00000513048.5

DHFR-206, Transcript of dihydrofolate reductase, humanhuman

TSL 1 (best)

Gene DHFR, Length 994 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR-206ENST00000513048 CNIH4Q9P003 139 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 MED11Q9P086 117 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 KIF17Q9P2E2 1029 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 OSGIN1Q9UJX0 560 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 NDRG4Q9ULP0 352 aaKnown RBP8.5□□□□□ -1.05
DHFR-206ENST00000513048 AKAP13Q12802 2813 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 PIEZO1Q92508 2521 aa8.5□□□□□ -1.05
DHFR-206ENST00000513048 MPDZO75970 2070 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 LOC100130705A0A1B0GUX0 176 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ZNF891A8MT65 544 aaPredicted RBP8.49□□□□□ -1.05
DHFR-206ENST00000513048 CDK2AP1O14519 115 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CDC42EP2O14613 210 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 GMFGO60234 142 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CDC40O60508 579 aaKnown RBP eCLIP8.49□□□□□ -1.05
DHFR-206ENST00000513048 NEURL1O76050 574 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 IGF2P01344 180 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 PNMTP11086 282 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 OSMP13725 252 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 PRKCAP17252 672 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 PTNP21246 168 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CHMP24386 653 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ITPKBP27987 946 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TACR3P29371 465 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 IFNGR2P38484 337 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CRISP1P54107 249 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 RRADP55042 308 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 RPP38P78345 283 aaKnown RBP8.49□□□□□ -1.05
DHFR-206ENST00000513048 EGR4Q05215 589 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 COX10Q12887 443 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 MED21Q13503 144 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 FHL1Q13642 323 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ABHD17BQ5VST6 288 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ZNF691Q5VV52 312 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TTC23Q5W5X9 447 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 UGT2A3Q6UWM9 527 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ARSKQ6UWY0 536 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 Q6ZPB1 254 aaPredicted RBP8.49□□□□□ -1.05
DHFR-206ENST00000513048 TMPRSS11FQ6ZWK6 438 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ADGRG3Q86Y34 549 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 P3H2Q8IVL5 708 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CYP4Z2PQ8N1L4 340 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CLEC1AQ8NC01 280 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 POC1BQ8TC44 478 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 FBLIM1Q8WUP2 373 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 KCNE4Q8WWG9 221 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 CYGBQ8WWM9 190 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ST8SIA1Q92185 356 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TMEM41AQ96HV5 264 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 HRASLS5Q96KN8 279 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 MUS81Q96NY9 551 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TMEM43Q9BTV4 400 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 SLC19A3Q9BZV2 496 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ING2Q9H160 280 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 RIBC2Q9H4K1 309 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 Q9H521 79 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ZNF552Q9H707 407 aaPredicted RBP8.49□□□□□ -1.05
DHFR-206ENST00000513048 ZNF556Q9HAH1 456 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 DEPPQ9NTK1 212 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 MED17Q9NVC6 651 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ANKRD10Q9NXR5 420 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TAS2R10Q9NYW0 307 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 PPP4R1LQ9P1A2 415 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 RPS6KB2Q9UBS0 482 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 DKK4Q9UBT3 224 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 FBXL2Q9UKC9 423 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 MED31Q9Y3C7 131 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 ORC6Q9Y5N6 252 aa8.49□□□□□ -1.05
DHFR-206ENST00000513048 TMEM72A0PK05 275 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 PINLYPA6NC86 204 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 LRRC3CA6NJW4 275 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 ZAR1LA6NP61 321 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 G3V3Y1 287 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 GNB5O14775 395 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 KLK10O43240 276 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 EFNA2O43921 213 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 NPIPB7O75200 414 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 PTP4A3O75365 173 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 CEACAM4O75871 244 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 SNX4O95219 450 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 WDPCPO95876 746 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 GP1BBP13224 206 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 IFI30P13284 250 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 CDH2P19022 906 aaPredicted RBP8.48□□□□□ -1.05
DHFR-206ENST00000513048 FUT1P19526 365 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 GSTM3P21266 225 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 GGT2P36268 569 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 GPR4P46093 362 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 CYB561P49447 251 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 FXYD6P3P58550 94 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 ESRRGP62508 458 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 IL1RL1Q01638 556 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 MFAP5Q13361 173 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 IL18R1Q13478 541 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 RAPSNQ13702 412 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 KEAP1Q14145 624 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 PDK3Q15120 406 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 TMEM44Q2T9K0 475 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 PLPPR5Q32ZL2 321 aa8.48□□□□□ -1.05
DHFR-206ENST00000513048 LAIR2Q6ISS4 152 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms