RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 CRB3Q9BUF7 120 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PTDSS2Q9BVG9 487 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SLC46A2Q9BY10 475 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SLC6A17Q9H1V8 727 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 RHBGQ9H310 441 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 OR52D1Q9H346 318 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 PHF11Q9UIL8 331 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 GTF2A1LQ9UNN4 478 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 LIPT1Q9Y234 373 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 ATG4BQ9Y4P1 393 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 SPAG17Q6Q759 2223 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 NLRC5Q86WI3 1866 aa7.07□□□□□ -1.28
NEDD9-208ENST00000504387 TRBV2A0A0J9YWF9 115 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 LINC00587B1AMM8 73 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 D6RAR5 112 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 KIAA0355O15063 1070 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GRM6O15303 877 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 HOXA2O43364 376 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GMFGO60234 142 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 LCMT2O60294 686 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SLCO2B1O94956 709 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PPP1R3DO95685 299 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FGBP02675 491 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 MAS1P04201 325 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 NDUFV2P19404 249 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 EDNRAP25101 427 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TSPAN31Q12999 210 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 CRMP1Q14194 572 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TAF13Q15543 124 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TEAD2Q15562 447 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GUCA2BQ16661 112 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SLC8B1Q6J4K2 584 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TFAP2EQ6VUC0 442 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 RNF165Q6ZSG1 346 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 CAMKMTQ7Z624 323 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 POGLUT1Q8NBL1 392 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SDR9C7Q8NEX9 313 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 OR9A2Q8NGT5 310 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 OR1S1Q8NH92 325 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SNX33Q8WV41 574 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 OR5P2Q8WZ92 322 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TRIM43Q96BQ3 446 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF578Q96N58 590 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF471Q9BX82 626 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TSPAN10Q9H1Z9 355 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ESRP2Q9H6T0 727 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 LDAHQ9H6V9 325 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF304Q9HCX3 659 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 A0A0G2JK05 382 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PLSCR5A0PG75 271 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 KRBOX1C9JBD0 128 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 BET1O15155 118 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 POP7O75817 140 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 UBL3O95164 117 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PCDH8O95206 1070 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 MT-ND5P03915 603 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 EPXP11678 715 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 C6P13671 934 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 RAB3AP20336 220 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 MAPK8P45983 427 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 OMPP47874 163 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 LUMP51884 338 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 B2MP61769 119 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 DEFB103AP81534 67 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FUT5Q11128 374 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GK2Q14410 553 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TRAM2Q15035 370 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM69Q5SWH9 247 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 B3GNTL1Q67FW5 361 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 RD3Q7Z3Z2 195 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 KCT2Q8NC54 265 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GAS2L1Q99501 681 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ZNF649Q9BS31 505 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 RNF208Q9H0X6 261 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 CACYBPQ9HB71 228 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 NOX4Q9NPH5 578 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ASF1BQ9NVP2 202 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PRKAG2Q9UGJ0 569 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 NDOR1Q9UHB4 597 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 C4orf47A7E2U8 309 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 KDM4EB2RXH2 506 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 AGPAT2O15120 278 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TGM5O43548 720 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 UGDHO60701 494 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 THY1P04216 161 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GSTM3P21266 225 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 HSD3B2P26439 372 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 HTR1FP30939 366 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PDX1P52945 283 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 UBE2IP63279 158 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 ST3GAL3Q11203 375 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 SP140Q13342 867 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 KLF9Q13886 244 aaPredicted RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 PDE7AQ13946 482 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GPNMBQ14956 572 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FNDC3BQ53EP0 1204 aaKnown RBP7.06□□□□□ -1.28
NEDD9-208ENST00000504387 FAM209BQ5JX69 171 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 GDF7Q7Z4P5 450 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TMEM150AQ86TG1 271 aa7.06□□□□□ -1.28
NEDD9-208ENST00000504387 TMEFF1Q8IYR6 380 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms