RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 HSF1Q00613 529 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 FOXF1Q12946 379 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 TRIM25Q14258 630 aaKnown RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 NRF1Q16656 503 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 GLYR1Q49A26 553 aaPredicted RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 ARHGAP11AQ6P4F7 1023 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 CBLL1Q75N03 491 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 CDH24Q86UP0 819 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ULK2Q8IYT8 1036 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 EID3Q8N140 333 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 CADM2Q8N3J6 435 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 OR5M1Q8NGP8 315 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 OR10Q1Q8NGQ4 319 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 VANGL1Q8TAA9 524 aaPredicted RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 NEIL3Q8TAT5 605 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ST8SIA1Q92185 356 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 MRGPRX4Q96LA9 322 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 ARHGDIGQ99819 225 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 PIGQQ9BRB3 760 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 EVA1AQ9H8M9 152 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 GORASP2Q9H8Y8 452 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 RPS6KA6Q9UK32 745 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 SAMD4AQ9UPU9 718 aaKnown RBP9.07□□□□□ -0.96
NUP54-203ENST00000504173 SH3GLB1Q9Y371 365 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 HEATR5AQ86XA9 2040 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 PCNX3Q9H6A9 2034 aa9.07□□□□□ -0.96
NUP54-203ENST00000504173 A0A1B0GTH9 108 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 A0A1B0GVC2 190 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 OR2M5A3KFT3 312 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 C7orf72A4D263 438 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 FAAHO00519 579 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 AQP7O14520 342 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 SUSD5O60279 629 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 FREM3P0C091 2139 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 PRKCAP17252 672 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 TNFRSF1BP20333 461 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ATP6V1B2P21281 511 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ADH6P28332 368 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 EIF1P41567 113 aaKnown RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 ZNF136P52737 540 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 B3GALT5-AS1P59052 145 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 RBPJQ06330 500 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 IFI44LQ53G44 452 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 PGM2L1Q6PCE3 622 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 AAGABQ6PD74 315 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 CYP2R1Q6VVX0 501 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 FKBP9P1Q75LS8 142 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 VTCN1Q7Z7D3 282 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 RANBP3LQ86VV4 465 aaPredicted RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 CARM1Q86X55 608 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 DHFR2Q86XF0 187 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 LACC1Q8IV20 430 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 GTPBP8Q8N3Z3 284 aaPredicted RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 ST6GALNAC3Q8NDV1 305 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 OR52E4Q8NGH9 312 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 POC1BQ8TC44 478 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ABTB1Q969K4 478 aaPredicted RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 SARAFQ96BY9 339 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ASB9Q96DX5 294 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 HSH2DQ96JZ2 352 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 LRGUKQ96M69 825 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ZNF559Q9BR84 538 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 TRIM15Q9C019 465 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 MMADHCQ9H3L0 296 aaPredicted RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 ACER3Q9NUN7 267 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 DCAF13Q9NV06 445 aaKnown RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 ACTR3BQ9P1U1 418 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 SPRR3Q9UBC9 169 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 RPS6KB2Q9UBS0 482 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 TESQ9UGI8 421 aaKnown RBP9.06□□□□□ -0.96
NUP54-203ENST00000504173 V9GYQ6 96 aa9.06□□□□□ -0.96
NUP54-203ENST00000504173 ZNF407Q9C0G0 2248 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 TMEM229AB2RXF0 380 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 NPIPA2E9PIF3 369 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 NPIPA3F8WFD2 350 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 H3BML4 177 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 LINC01387J3KSC0 135 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ACTL6AO96019 429 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ABOP16442 354 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 BMP7P18075 431 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 CHMP24386 653 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ELK4P28324 431 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 SSTR2P30874 369 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 PTGS2P35354 604 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 SLC1A3P43003 542 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 HTR3AP46098 478 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 OR1E2P47887 323 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 GFRA1P56159 465 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 MS4A2Q01362 244 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 MERTKQ12866 999 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 TRAP1Q12931 704 aaKnown RBP9.05□□□□□ -0.96
NUP54-203ENST00000504173 TMEM44Q2T9K0 475 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 SLC25A53Q5H9E4 307 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 MTX3Q5HYI7 312 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 NHSL2Q5HYW2 709 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 WBP2NLQ6ICG8 309 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 LCN8Q6JVE9 175 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 POMZP3Q6PJE2 187 aa9.05□□□□□ -0.96
NUP54-203ENST00000504173 ENPP6Q6UWR7 440 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms