RNA–Protein interactions for RNA: ENST00000501400.1

LINC00535-201, long intergenic non-protein coding RNA 535, humanhuman

TSL 1 (best) BASIC

Gene LINC00535, Length 1,914 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-201ENST00000501400 MED22Q15528 200 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 FAM69BQ5VUD6 431 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 WBP2NLQ6ICG8 309 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 TMEM205Q6UW68 189 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 MARCH3Q86UD3 253 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 METTL21AQ8WXB1 218 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 PLEKHA8Q96JA3 519 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 OPALINQ96PE5 141 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 TEX12Q9BXU0 123 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 LAT2Q9GZY6 243 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 FGF20Q9NP95 211 aaPredicted RBP16.68■□□□□ 0.26
LINC00535-201ENST00000501400 TIMMDC1Q9NPL8 285 aa16.68■□□□□ 0.26
LINC00535-201ENST00000501400 FAM183AA6NL82 134 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 GTPBP1O00178 669 aaKnown RBP16.67■□□□□ 0.26
LINC00535-201ENST00000501400 BCL10O95999 233 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 CDK4P11802 303 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 GADD45AP24522 165 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 TGFBR1P36897 503 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 CDH11P55287 796 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 MC2RQ01718 297 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 RAB40BQ12829 278 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 NXNL2Q5VZ03 156 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 OAFQ86UD1 273 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 C8orf44Q96CB5 159 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 SH3YL1Q96HL8 342 aaPredicted RBP16.67■□□□□ 0.26
LINC00535-201ENST00000501400 TNFRSF13CQ96RJ3 184 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 MGLLQ99685 303 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 TAPBPLQ9BX59 468 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 R4GN57 208 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 PCNX3Q9H6A9 2034 aa16.67■□□□□ 0.26
LINC00535-201ENST00000501400 TMEM200CA6NKL6 621 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 SOCS6O14544 535 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FLRT2O43155 660 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FADS1O60427 444 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 HSMCR30P0CW71 290 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ETV5P41161 510 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 RGS6P49758 472 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ETV1P50549 477 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 SSX1Q16384 188 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 SLC35F1Q5T1Q4 408 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 RALGAPA1Q6GYQ0 2036 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FAM199XQ6PEV8 388 aaPredicted RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 C19orf48Q6RUI8 117 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FAM198BQ6UWH4 519 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 SHFQ7M4L6 423 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 CPEB2Q7Z5Q1 589 aaKnown RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 LRRC17Q8N6Y2 441 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 NANOGP1Q8N7R0 232 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 TBC1D15Q8TC07 691 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 RHBDD1Q8TEB9 315 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 TP53INP1Q96A56 240 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 SGTBQ96EQ0 304 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 OR6C70A6NIJ9 312 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FOXD2O60548 495 aaPredicted RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 PPP1R3DO95685 299 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 EVI2BP34910 448 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 LIMK1P53667 647 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FOXK2Q01167 660 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 DBPQ10586 325 aaPredicted RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 C3orf38Q5JPI3 329 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ZNF362Q5T0B9 420 aaPredicted RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 CXXC5Q7LFL8 322 aaKnown RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ZBTB46Q86UZ6 589 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ATCAYQ86WG3 371 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 CPOQ8IVL8 374 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 NUBPLQ8TB37 319 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 VMP1Q96GC9 406 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 CCNL2Q96S94 520 aaPredicted RBP16.66■□□□□ 0.26
LINC00535-201ENST00000501400 IFT27Q9BW83 186 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 MND1Q9BWT6 205 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 HCAR1Q9BXC0 346 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FN3KQ9H479 309 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 FBXO8Q9NRD0 319 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 CMC2Q9NRP2 79 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 ERGIC3Q9Y282 383 aa16.66■□□□□ 0.26
LINC00535-201ENST00000501400 TRBV11-1A0A0K0K1C0 115 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 SNTNA6NMZ2 147 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 HCRTR2O43614 444 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 HTR1FP30939 366 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 TSTQ16762 297 aaKnown RBP16.65■□□□□ 0.26
LINC00535-201ENST00000501400 TMEM44Q2T9K0 475 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 KLHL22Q53GT1 634 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 PLBD1Q6P4A8 553 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 PROKR2Q8NFJ6 384 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 THAP3Q8WTV1 239 aaPredicted RBP16.65■□□□□ 0.26
LINC00535-201ENST00000501400 LPAR4Q99677 370 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 SLC19A3Q9BZV2 496 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 MED20Q9H944 212 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 WDR54Q9H977 334 aa16.65■□□□□ 0.26
LINC00535-201ENST00000501400 TEX51A0A1B0GUA7 166 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 NDUFB5O43674 189 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 AIREO43918 545 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 NADKO95544 446 aaPredicted RBP16.64■□□□□ 0.26
LINC00535-201ENST00000501400 CYC1P08574 325 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 SLC26A5P58743 744 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 PSPHP78330 225 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 EGR4Q05215 589 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 SPHARQ15513 63 aa16.64■□□□□ 0.26
LINC00535-201ENST00000501400 TOMM34Q15785 309 aaPredicted RBP16.64■□□□□ 0.26
LINC00535-201ENST00000501400 NIPAL3Q6P499 406 aa16.64■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms