RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ZPLD1Q8TCW7 415 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ANKRD49Q8WVL7 239 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 HAVCR1Q96D42 359 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 RPRD1AQ96P16 312 aaPredicted RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 PSKH2Q96QS6 385 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 IL4I1Q96RQ9 567 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ZBTB18Q99592 522 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 CNPY3Q9BT09 278 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 SRXN1Q9BYN0 137 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 RAB34Q9BZG1 259 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 LRRN3Q9H3W5 708 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 EHD1Q9H4M9 534 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 ZNF702PQ9H963 129 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 TNFRSF19Q9NS68 423 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 IL36GQ9NZH8 169 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 PHF11Q9UIL8 331 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 PTBP2Q9UKA9 531 aaKnown RBP2.97□□□□□ -1.93
SMC4-225ENST00000497203 ANGPTL2Q9UKU9 493 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 CDH9Q9ULB4 789 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 CLEC4EQ9ULY5 219 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 KANK1Q14678 1352 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 LRRK1Q38SD2 2015 aa2.97□□□□□ -1.93
SMC4-225ENST00000497203 IGLV3-10A0A075B6K4 115 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 KLF18A0A0U1RQI7 1052 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CXCL11O14625 94 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 POLR2DO15514 142 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 CXCL13O43927 109 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 IGHG4P01861 327 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CAPN1P07384 714 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 GIG44P09565 113 aaPredicted RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 RPL13AP40429 203 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 EFNB2P52799 333 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 AIF1P55008 147 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 IGLV3-21P80748 117 aaPredicted RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 HMGN5P82970 282 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 ARL6IP1Q15041 203 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 ISXQ2M1V0 245 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 PRR30Q53SZ7 412 aaPredicted RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 TPGS2Q68CL5 300 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 ZSCAN25Q6NSZ9 544 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 WDR74Q6RFH5 385 aaPredicted RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 CXCL17Q6UXB2 119 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 GDPD3Q7L5L3 318 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 ARCQ7LC44 396 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 TRPM8Q7Z2W7 1104 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 EFL1Q7Z2Z2 1120 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 ZNF677Q86XU0 584 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 SLC35F2Q8IXU6 374 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 BHLHE23Q8NDY6 225 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 TRPV1Q8NER1 839 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 HTR3CQ8WXA8 447 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 NEIL2Q969S2 332 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 SLC25A38Q96DW6 304 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 NOL4LQ96MY1 436 aaPredicted RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 RBM14Q96PK6 669 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 SMIM14Q96QK8 99 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 NPAS2Q99743 824 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CAPS2Q9BXY5 557 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CHIAQ9BZP6 476 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 RAB18Q9NP72 206 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CLEC4AQ9UMR7 237 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 PRPF19Q9UMS4 504 aaKnown RBP2.96□□□□□ -1.94
SMC4-225ENST00000497203 COPS3Q9UNS2 423 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 MOKQ9UQ07 419 aa2.96□□□□□ -1.94
SMC4-225ENST00000497203 CLSPNQ9HAW4 1339 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 RAI1Q7Z5J4 1906 aaPredicted RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 IGHV1OR15-1A0A075B7D0 117 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 TRDCB7Z8K6 153 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 KIF2AO00139 706 aaPredicted RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 OR10H3O60404 316 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 SURF6O75683 361 aaKnown RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 KRTAP5-8O75690 187 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 SLITRK3O94933 977 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 AP2A1O95782 977 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 IGHV3-23P01764 117 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 LGALS2P05162 132 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 P0C879 139 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 POU2F1P14859 743 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 PSMB1P20618 241 aaKnown RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 COX5AP20674 150 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 LEPP41159 167 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 MAP3K8P41279 467 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 CCT3P49368 545 aaKnown RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 CASP4P49662 377 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 HSPA2P54652 639 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 UBE2HP62256 183 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 CCDC173Q0VFZ6 552 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 C1orf61Q13536 156 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 ELAVL3Q14576 367 aaKnown RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 SLC15A2Q16348 729 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 FILIP1LQ4L180 1135 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 SFT2D3Q587I9 215 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 HSD17B13Q7Z5P4 300 aaPredicted RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 LRRC75A-AS1Q8N1F1 130 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 SHC3Q92529 594 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 B3GALT6Q96L58 329 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 SECISBP2Q96T21 854 aaKnown RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 ZNF184Q99676 751 aaPredicted RBP2.95□□□□□ -1.94
SMC4-225ENST00000497203 MAPKAP1Q9BPZ7 522 aa2.95□□□□□ -1.94
SMC4-225ENST00000497203 ZNF670Q9BS34 389 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms