RNA–Protein interactions for RNA: ENST00000495293.5

RBM39-240, Transcript of RNA binding motif protein 39, human

TSL 2

Gene RBM39, Length 759 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBM39-240	ENST00000495293	VN1R1	Q9GZP7	353 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	OR51B5	Q9H339	312 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	KLHL31	Q9H511	634 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	WDR55	Q9H6Y2	383 aa	Predicted RBP	4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	PLEKHA2	Q9HB19	425 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	LYRM4	Q9HD34	91 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	SPAG4	Q9NPE6	437 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	PRTFDC1	Q9NRG1	225 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	LYAR	Q9NX58	379 aa	Known RBP	4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	PHF11	Q9UIL8	331 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	PCTP	Q9UKL6	214 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	FBXW2	Q9UKT8	454 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	CAMK2A	Q9UQM7	478 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	RNF11	Q9Y3C5	154 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	MMACHC	Q9Y4U1	282 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	AP4S1	Q9Y587	144 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	LAMA5	O15230	3695 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	SCN3A	Q9NY46	2000 aa		4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	DSP	P15924	2871 aa	Known RBP	4.15	□□□□□ -1.75
RBM39-240	ENST00000495293	CCDC88C	Q9P219	2028 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	PTPRQ	Q9UMZ3	2332 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	LOC102723996	A0A087X1L8	192 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	RNF103-CHMP3	A0A140T963	221 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	hCG_1807616	A0A1W2PRN6	198 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293		A8MUA0	341 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	GTPBP1	O00178	669 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	OR7A17	O14581	309 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	HNRNPR	O43390	633 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	DENR	O43583	198 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CTNS	O60931	367 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	JRK	O75564	520 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	MYO1D	O94832	1006 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	OR4F21	O95013	312 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CLEC3B	P05452	202 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CHRNG	P07510	517 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	RPS17	P08708	135 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	COX6A1	P12074	109 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ATP6V1B1	P15313	513 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	TSPAN8	P19075	237 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	EPOR	P19235	508 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	TCN1	P20061	433 aa	Predicted RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CD22	P20273	847 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	HIST1H1T	P22492	207 aa	Predicted RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ATP5A1	P25705	553 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ARL3	P36405	182 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ATP4B	P51164	291 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	LIM2	P55344	173 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	KCNK10	P57789	538 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	FOXL2	P58012	376 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	RHAG	Q02094	409 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ZNF33B	Q06732	778 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	BNIP2	Q12982	314 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	LCP2	Q13094	533 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	RUNX2	Q13950	521 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	MEP1A	Q16819	746 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	IMPG1	Q17R60	797 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CNPY1	Q3B7I2	92 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ADPRM	Q3LIE5	342 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	GGTA1P	Q4G0N0	100 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	UNC50	Q53HI1	259 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	SFT2D3	Q587I9	215 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CCNYL2	Q5T2Q4	361 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	REP15	Q6BDI9	236 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	PAPD4	Q6PIY7	484 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	LINC00696	Q6ZRV3	163 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ZBTB49	Q6ZSB9	765 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	GPRIN3	Q6ZVF9	776 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	KRT74	Q7RTS7	529 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	SPATA19	Q7Z5L4	167 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CUZD1	Q86UP6	607 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	GPR180	Q86V85	440 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	DDIAS	Q8IXT1	998 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	CLYBL	Q8N0X4	340 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ZCCHC7	Q8N3Z6	543 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	MARVELD2	Q8N4S9	558 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	SLC5A8	Q8N695	610 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	HORMAD2	Q8N7B1	307 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ACOT4	Q8N9L9	421 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	FAM47B	Q8NA70	645 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	TNIP2	Q8NFZ5	429 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	OR52B6	Q8NGF0	335 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	NFKBID	Q8NI38	313 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	WDR20	Q8TBZ3	569 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	MIPOL1	Q8TD10	442 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	LZIC	Q8WZA0	190 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	TANK	Q92844	425 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	DAZL	Q92904	295 aa	Known RBP	4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	PNPLA2	Q96AD5	504 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ROPN1L	Q96C74	230 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ASB9	Q96DX5	294 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	L3HYPDH	Q96EM0	354 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	NRBF2	Q96F24	287 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	OR52B2	Q96RD2	323 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	ZNF382	Q96SR6	550 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	NPAS2	Q99743	824 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	NUDT9	Q9BW91	350 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	FAIM2	Q9BWQ8	316 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	OSBPL11	Q9BXB4	747 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	DEFB126	Q9BYW3	111 aa		4.14	□□□□□ -1.75
RBM39-240	ENST00000495293	MUC13	Q9H3R2	512 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms