RNA–Protein interactions for RNA: ENST00000494582.1

LINC00488-201, long intergenic non-protein coding RNA 488, humanhuman

TSL 1 (best) BASIC

Gene LINC00488, Length 2,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00488-201ENST00000494582 XAGE5Q8WWM1 108 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PAWRQ96IZ0 340 aaKnown RBP9.39□□□□□ -0.91
LINC00488-201ENST00000494582 SAMD8Q96LT4 415 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 PIGMQ9H3S5 423 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 TMEM185BQ9H7F4 350 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 C2orf42Q9NWW7 574 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 CD84Q9UIB8 345 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 LRFN2Q9ULH4 789 aa9.39□□□□□ -0.91
LINC00488-201ENST00000494582 IGLV3-16A0A075B6K0 115 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 POM121BA6NF01 834 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 NAP1L6A6NFF2 107 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 RTCAO00442 366 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 UBE2CO00762 179 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 NPC1O15118 1278 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 SMAD9O15198 467 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 PRKRAO75569 313 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 THY1P04216 161 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZGLP1P0C6A0 271 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 IL9P15248 144 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MUC1P15941 1255 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 SPI1P17947 270 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 LAG3P18627 525 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 S100PP25815 95 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 GPX4P36969 197 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MAGEB1P43366 347 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 GPR143P51810 404 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 CAPZA1P52907 286 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 BLOC1S1P78537 153 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF85Q03923 595 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 SLBPQ14493 270 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 LY6G6FQ5SQ64 297 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 DMKNQ6E0U4 476 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 TSSK4Q6SA08 328 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZG16BQ96DA0 208 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MRPL38Q96DV4 380 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ARL5BQ96KC2 179 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF285Q96NJ3 590 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF607Q96SK3 696 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 GPBP1L1Q9HC44 474 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MIEF1Q9NQG6 463 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 PRMT8Q9NR22 394 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ACSS1Q9NUB1 689 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 KLHL9Q9P2J3 617 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 KLHL42Q9P2K6 505 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 SLC16A5O15375 505 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 FLRT2O43155 660 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 TXNL1O43396 289 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 LY86O95711 162 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 S100A8P05109 93 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 S100A9P06702 114 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZDHHC11BP0C7U3 371 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 TMIGD3P0DMS9 266 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 CLUP10909 449 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF44P15621 663 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MPIP34949 423 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 PSEN2P49810 448 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 HCCSP53701 268 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 MANFP55145 182 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ACTR1AP61163 376 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 RPS11P62280 158 aaKnown RBP eCLIP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 TSTA3Q13630 321 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 CBFBQ13951 182 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ETV3LQ6ZN32 361 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF620Q6ZNG0 422 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 FCRLAQ7L513 359 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF546Q86UE3 836 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 APOBEC3FQ8IUX4 373 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 SGK3Q96BR1 496 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 CACYBPQ9HB71 228 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ACKR4Q9NPB9 350 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF629Q9UEG4 869 aaPredicted RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 FBXL4Q9UKA2 621 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ICKQ9UPZ9 632 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 CARHSP1Q9Y2V2 147 aaKnown RBP9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF337Q9Y3M9 751 aa9.38□□□□□ -0.91
LINC00488-201ENST00000494582 ANAPC1Q9H1A4 1944 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 TRAV1-2A0A0B4J238 106 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 RFPL4AA6NLU0 287 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 RFPL4AL1F8VTS6 287 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 CACNB4O00305 520 aaPredicted RBP9.37□□□□□ -0.91
LINC00488-201ENST00000494582 SYT5O00445 386 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 SNAPC5O75971 98 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 VNN2O95498 520 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 MT-ND5P03915 603 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 RLN1P04808 185 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 FBP1P09467 338 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 ALPPL2P10696 532 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 RPS12P25398 132 aaKnown RBP9.37□□□□□ -0.91
LINC00488-201ENST00000494582 MAPK3P27361 379 aaPredicted RBP9.37□□□□□ -0.91
LINC00488-201ENST00000494582 DPP4P27487 766 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 PYCR1P32322 319 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 PNLIPRP1P54315 467 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 FXYD6P3P58550 94 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 BEX3Q00994 111 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 PLA2G7Q13093 441 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 RAB33AQ14088 237 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 ZNF124Q15973 351 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 ARSIQ5FYB1 569 aa9.37□□□□□ -0.91
LINC00488-201ENST00000494582 BAIAP2L2Q6UXY1 529 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms