RNA–Protein interactions for RNA: ENST00000493587.1

VPS13B-205, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 2

Gene VPS13B, Length 3,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-205ENST00000493587 DOK6Q6PKX4 331 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 C19orf48Q6RUI8 117 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM192Q8IY95 271 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SLC44A3Q8N4M1 653 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 FBXO15Q8NCQ5 510 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PROKR2Q8NFJ6 384 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 OR56B1Q8NGI3 324 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 OR52B4Q8NGK2 314 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 HSD17B8Q92506 261 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 MRI1Q9BV20 369 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 DUSP16Q9BY84 665 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 DNAJC4Q9NNZ3 241 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NMRK2Q9NPI5 230 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NLE1Q9NVX2 485 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TAS2R10Q9NYW0 307 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 CALML5Q9NZT1 146 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 CARHSP1Q9Y2V2 147 aaKnown RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SNX11Q9Y5W9 270 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 USP3Q9Y6I4 520 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TCRBV21S2A2A0A5A6 115 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM235A6NFC5 223 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 HMSDA8MTL9 139 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 B4GALT5O43286 388 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SCGNO76038 276 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 IGHEP01854 428 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 LGALS2P05162 132 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 EIF4EP06730 217 aaKnown RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SFTA3P0C7M3 94 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NME2P22392 152 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 CHI3L1P36222 383 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ADCYAP1R1P41586 468 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 MVDP53602 400 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PNLIPRP2P54317 469 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PTGES3Q15185 160 aaKnown RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TAF13Q15543 124 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 FAM110CQ1W6H9 321 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 TMEM255AQ5JRV8 349 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 HACD4Q5VWC8 232 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ZDHHC20Q5W0Z9 365 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 MOB3CQ70IA8 216 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 BCDIN3DQ7Z5W3 292 aaKnown RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PHYKPLQ8IUZ5 450 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF619Q8N2I2 560 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 OR52N2Q8NGI0 321 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 OR1N1Q8NGS0 311 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 CD300LFQ8TDQ1 290 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 SPATA33Q96N06 139 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NIPSNAP1Q9BPW8 284 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PBX4Q9BYU1 374 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 NIF3L1Q9GZT8 377 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 RLIMQ9NVW2 624 aa6.39□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF230Q9UIE0 474 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 PRG3Q9Y2Y8 225 aaPredicted RBP6.39□□□□□ -1.39
VPS13B-205ENST00000493587 LOC102724200A0A096LPH7 203 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR5H15A6NDH6 313 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR5H1A6NKK0 313 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 M0QZK8 103 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 AQP7O14520 342 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 EFSO43281 561 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SUV39H1O43463 412 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 DNAJB6O75190 326 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 WNT1P04628 370 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CRHP06850 196 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ANXA5P08758 320 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF865P0CJ78 1059 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TXNP10599 105 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ACKR3P25106 362 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 HOXA11P31270 313 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CD80P33681 288 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 E2F1Q01094 437 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 FABP5Q01469 135 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 AIMP2Q13155 320 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 DOC2BQ14184 412 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 HNF4GQ14541 408 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ISXQ2M1V0 245 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 PLK5Q496M5 336 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 KIAA0319Q5VV43 1072 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 LEMD1Q68G75 181 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NUP54Q7Z3B4 507 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GOLGA7Q7Z5G4 137 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 LDB1Q86U70 411 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 GPSM1Q86YR5 675 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SLC30A8Q8IWU4 369 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ETFBKMTQ8IXQ9 262 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TCEANCQ8N8B7 351 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ZNF671Q8TAW3 534 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SMAP2Q8WU79 429 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TAAR8Q969N4 342 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NT5C3BQ969T7 300 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ISG20Q96AZ6 181 aaKnown RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 NUDT11Q96G61 164 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SENP5Q96HI0 755 aaPredicted RBP6.38□□□□□ -1.39
VPS13B-205ENST00000493587 CDK15Q96Q40 435 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 ABHD1Q96SE0 405 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 COPS8Q99627 209 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 SULT4A1Q9BR01 284 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 TMPRSS13Q9BYE2 586 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 OR52A5Q9H2C5 316 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 MAN2C1Q9NTJ4 1040 aa6.38□□□□□ -1.39
VPS13B-205ENST00000493587 FAM120CQ9NX05 1096 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms