RNA–Protein interactions for RNA: ENST00000491581.5

HDAC3-211, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-211ENST00000491581 NCMAPQ5T1S8 102 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 EMBQ6PCB8 327 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 B3GLCTQ6Y288 498 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 BHLHA15Q7RTS1 189 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 MTERF4Q7Z6M4 381 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 VRK2Q86Y07 508 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 ADGRG3Q86Y34 549 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 MISPQ8IVT2 679 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 FAM71CQ8NEG0 241 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 TOR1AIP2Q8NFQ8 470 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 OR8J2Q8NGG1 315 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 OR52E4Q8NGH9 312 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 OR9I1Q8NGQ6 314 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 OR52N5Q8NH56 324 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 PIGTQ969N2 578 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 CPNE4Q96A23 557 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 VPS33AQ96AX1 596 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 KCTD12Q96CX2 325 aaKnown RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 DTNBP1Q96EV8 351 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 AURKBQ96GD4 344 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-211ENST00000491581 MRGPRX4Q96LA9 322 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM109Q9BVC6 243 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 CCDC106Q9BWC9 280 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 LAT2Q9GZY6 243 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 SLC38A1Q9H2H9 487 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 ASIC5Q9NY37 505 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 GPR52Q9Y2T5 361 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 WDR45Q9Y484 360 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 ACTL7BQ9Y614 415 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 MTORP42345 2549 aa7.87□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM72A0PK05 275 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 SHISA9B4DS77 424 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 E9PBE3 544 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 H3BNH8 94 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 SULT2B1O00204 365 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 FRS3O43559 492 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 CYTIPO60759 359 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 DNAJA2O60884 412 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 LY6HO94772 140 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 GOSR1O95249 250 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 CD8AP01732 235 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 IGHV4-39P01824 125 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 DANCRP0C864 163 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 PRG2P13727 222 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 ETFAP13804 333 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 LBPP18428 481 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 FPR1P21462 350 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 UQCRC2P22695 453 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 ELK4P28324 431 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 CHI3L1P36222 383 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 SERPINB5P36952 375 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 RPL3P39023 403 aaKnown RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 EIF1P41567 113 aaKnown RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 OR3A2P47893 321 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF83P51522 516 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 SUMO3P55854 103 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 ATP5J2P56134 94 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 RAC3P60763 192 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 HOXC5Q00444 222 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 OCRLQ01968 901 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 KRTAP21-3Q3LHN1 58 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 SYT14P1Q58G82 188 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 PDSS1Q5T2R2 415 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 C20orf204Q6ZNR8 217 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 STK32CQ86UX6 486 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 LRRC75A-AS1Q8N1F1 130 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 C10orf111Q8N326 155 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 MREGQ8N565 214 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 ZNF563Q8TA94 476 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM171Q8WVE6 324 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.86□□□□□ -1.158e-7■■■■■ 32.1
HDAC3-211ENST00000491581 KISS1RQ969F8 398 aaPredicted RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 GTPBP3Q969Y2 492 aaKnown RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 REXO5Q96IC2 774 aaKnown RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 OR52B2Q96RD2 323 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 PRPF18Q99633 342 aaKnown RBP7.86□□□□□ -1.15
HDAC3-211ENST00000491581 PIP5K1AQ99755 562 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 GSX2Q9BZM3 304 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 NMUR2Q9GZQ4 415 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 HOXD1Q9GZZ0 328 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 MEAF6Q9HAF1 191 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 BCO1Q9HAY6 547 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 AIG1Q9NVV5 245 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 EDARQ9UNE0 448 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 LIPT1Q9Y234 373 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 CHST2Q9Y4C5 530 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 RNF115Q9Y4L5 304 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
HDAC3-211ENST00000491581 USF3Q68DE3 2245 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 PRSS51A0A1B0GVH4 220 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 TMEM120BA0PK00 339 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 CCDC154A6NI56 674 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ETV2O00321 342 aaPredicted RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ARHGEF9O43307 516 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 GPRIN2O60269 458 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 EIF4E2O60573 245 aaKnown RBP7.85□□□□□ -1.15
HDAC3-211ENST00000491581 MYZAPP0CAP1 466 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 ADH6P28332 368 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 LCN1P31025 176 aa7.85□□□□□ -1.15
HDAC3-211ENST00000491581 S100A3P33764 101 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms