RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 CDKL1Q00532 357 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PRDX1Q06830 199 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 HSPA14Q0VDF9 509 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 FLOT2Q14254 428 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 ELAVL1Q15717 326 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 BCL2A1Q16548 175 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PPP1R3AQ16821 1122 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 IMPG1Q17R60 797 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 UGT3A2Q3SY77 523 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SPATS1Q496A3 300 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 CCSMST1Q4G0I0 132 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 KLF17Q5JT82 389 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SAMD4BQ5PRF9 694 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 REP15Q6BDI9 236 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 OGFOD2Q6N063 350 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 TRIM40Q6P9F5 258 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PGM2L1Q6PCE3 622 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 UBE2R2Q712K3 238 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 GOLGA7Q7Z5G4 137 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 FAM9CQ8IZT9 166 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 TMEM132CQ8N3T6 1108 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 RAB42Q8N4Z0 105 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 CDYL2Q8N8U2 506 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 MORN4Q8NDC4 146 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 UBTD2Q8WUN7 234 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 KISS1RQ969F8 398 aaPredicted RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 RAD51AP1Q96B01 352 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PPP3R2Q96LZ3 170 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 DGAT2Q96PD7 388 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 ZBTB18Q99592 522 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 CD244Q9BZW8 370 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 TRIM15Q9C019 465 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 NOL11Q9H8H0 719 aaKnown RBP6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 IPPKQ9H8X2 491 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PARVBQ9HBI1 364 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SPAG4Q9NPE6 437 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 POMPQ9Y244 141 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 PRSS21Q9Y6M0 314 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 DOCK11Q5JSL3 2073 aa6.46□□□□□ -1.38
EXOSC3-206ENST00000489414 SRRM5B3KS81 715 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 GPANK1O95872 356 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 KRT6AP02538 564 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 CATP04040 527 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 KRT6BP04259 564 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 GPX3P22352 226 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 PTAFRP25105 342 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 CD40P25942 277 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 KRT6CP48668 564 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 MRPL19P49406 292 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 PPOXP50336 477 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 IDH3GP51553 393 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 RPL15P61313 204 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 MYBPC1Q00872 1141 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 EGFEM1PQ0D2K5 195 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 SMU1Q2TAY7 513 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 PDCD4Q53EL6 469 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 FBXO48Q5FWF7 155 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 COQ5Q5HYK3 327 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 ACSM5Q6NUN0 579 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 LRRC70Q7Z2Q7 622 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 ARPINQ7Z6K5 226 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 CARM1Q86X55 608 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 FNDC5Q8NAU1 212 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 OR1J4Q8NGS1 313 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 LKAAEAR1Q8TD35 194 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 PTPMT1Q8WUK0 201 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 DNAJC9Q8WXX5 260 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 DAZLQ92904 295 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 POP5Q969H6 163 aaKnown RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 GMPPAQ96IJ6 420 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 C3orf30Q96M34 536 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 LRGUKQ96M69 825 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 KCNA7Q96RP8 456 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 HOPXQ9BPY8 73 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 OR8D2Q9GZM6 311 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 RAB1BQ9H0U4 201 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 ACTR8Q9H981 624 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 S100A14Q9HCY8 104 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 PRM3Q9NNZ6 103 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 TNFRSF12AQ9NP84 129 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 SDR39U1Q9NRG7 319 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 AIG1Q9NVV5 245 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 TEX10Q9NXF1 929 aaPredicted RBP6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 ZIM2Q9NZV7 527 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 ADAM29Q9UKF5 820 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 SNX6Q9UNH7 406 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 TIMM22Q9Y584 194 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 CLCA3PQ9Y6N3 262 aa6.45□□□□□ -1.38
EXOSC3-206ENST00000489414 CCDC154A6NI56 674 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 PPP6CO00743 305 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 SLC22A3O75751 556 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 B3GALT4O96024 378 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 NPPAP01160 153 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ERGP11308 486 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 FCGR2AP12318 317 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ACADSP16219 412 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 ATP6V1C1P21283 382 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 MAPK1P28482 360 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 CCR7P32248 378 aa6.44□□□□□ -1.38
EXOSC3-206ENST00000489414 CASP3P42574 277 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms