RNA–Protein interactions for RNA: ENST00000489053.1

HDAC6-232, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-232ENST00000489053 EXOSC3Q9NQT5 275 aaKnown RBP8.16□□□□□ -1.1
HDAC6-232ENST00000489053 ACER3Q9NUN7 267 aa8.16□□□□□ -1.1
HDAC6-232ENST00000489053 CCDC167Q9P0B6 97 aa8.16□□□□□ -1.1
HDAC6-232ENST00000489053 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.16□□□□□ -1.1
HDAC6-232ENST00000489053 CHRNA9Q9UGM1 479 aa8.16□□□□□ -1.1
HDAC6-232ENST00000489053 CORO2BQ9UQ03 480 aa8.16□□□□□ -1.1
HDAC6-232ENST00000489053 FREM3P0C091 2139 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 ITPR3Q14573 2671 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 A0A0G2JPF8 293 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CENPVL1A0A0U1RR11 272 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 AGAP5A6NIR3 686 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 EVPLLA8MZ36 301 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HNRNPCL2B2RXH8 293 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HNRNPCL3B7ZW38 293 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 ANGPT2O15123 496 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HNRNPCL1O60812 293 aaKnown RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 FESP07332 822 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 ZCCHC18P0CG32 403 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HNRNPCL4P0DMR1 293 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 ETFAP13804 333 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 NID1P14543 1247 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SHC1P29353 583 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 PGM1P36871 562 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CLK1P49759 484 aaKnown RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 DIO1P49895 249 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 IST1P53990 364 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 NCALDP61601 193 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 FADDQ13158 208 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SQLEQ14534 574 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 MAPK14Q16539 360 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 AGKQ53H12 422 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SLC25A53Q5H9E4 307 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 COX20Q5RI15 118 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 MRPL2Q5T653 305 aaKnown RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 PAMR1Q6UXH9 720 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 PLEKHM3Q6ZWE6 761 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 MAVSQ7Z434 540 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 GALNT5Q7Z7M9 940 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 WFDC8Q8IUA0 241 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 TUSC5Q8IXB3 177 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 UBE2J2Q8N2K1 259 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CADM2Q8N3J6 435 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 OR52P1PQ8NH57 321 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CNOT9Q92600 299 aaKnown RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 KISS1RQ969F8 398 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SPDL1Q96EA4 605 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 AURKBQ96GD4 344 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 MAGEB18Q96M61 343 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 WFIKKN1Q96NZ8 548 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 NPAS1Q99742 590 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SIKE1Q9BRV8 207 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 NAA11Q9BSU3 229 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HDHD5Q9BXW7 423 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SRXN1Q9BYN0 137 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 ACTR6Q9GZN1 396 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SAP130Q9H0E3 1048 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 UBTD1Q9HAC8 227 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CTPS2Q9NRF8 586 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 PLSCR4Q9NRQ2 329 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 CCM2LQ9NUG4 571 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 SELENONQ9NZV5 590 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 C6orf203Q9P0P8 240 aaPredicted RBP8.15□□□□□ -1.1
HDAC6-232ENST00000489053 RPS6KB2Q9UBS0 482 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 IFT52Q9Y366 437 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HDGFL3Q9Y3E1 203 aa8.15□□□□□ -1.1
HDAC6-232ENST00000489053 HRNRQ86YZ3 2850 aaPredicted RBP8.15□□□□□ -1.11
HDAC6-232ENST00000489053 HIVEP1P15822 2718 aa8.15□□□□□ -1.11
HDAC6-232ENST00000489053 AKAP6Q13023 2319 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 A0A096LPI6 279 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TMED7-TICAM2A0A0A6YYA0 188 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 A0A0G2JND7 137 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 CLDN24A6NM45 220 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 CLIC1O00299 241 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 GPR171O14626 319 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 EIF1BO60739 113 aaKnown RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 NTN1O95631 604 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 CGAP01215 116 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 HRGP04196 525 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 CHRM4P08173 479 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 VIMP08670 466 aaKnown RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TROVE2P10155 538 aaKnown RBP eCLIP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 FPR1P21462 350 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 GTF2E2P29084 291 aaKnown RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 SLC1A3P43003 542 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 MAP2K6P52564 334 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 NR1H2P55055 460 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 SLC35A1P78382 337 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 FUT5Q11128 374 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 P2RY6Q15077 328 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 BEX5Q5H9J7 111 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 GCNT6Q5T4J0 391 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 SLC2A7Q6PXP3 512 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TMPPEQ6ZT21 453 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 FAM71CQ8NEG0 241 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 BBS10Q8TAM1 723 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 PIGXQ8TBF5 258 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 CKAP2Q8WWK9 683 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 THOC1Q96FV9 657 aaKnown RBP8.14□□□□□ -1.11
HDAC6-232ENST00000489053 TMEM19Q96HH6 336 aa8.14□□□□□ -1.11
HDAC6-232ENST00000489053 KLHDC3Q9BQ90 382 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms