RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 A8MVJ9 347 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 SNAPINO95295 136 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 GMFBP60983 142 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 POU4F2Q12837 409 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 KRBOX4Q5JUW0 171 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 CDC73Q6P1J9 531 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 SLC29A4Q7RTT9 530 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 WDSUB1Q8N9V3 476 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 RGMAQ96B86 450 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 ZG16BQ96DA0 208 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 SLITRK2Q9H156 845 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 CHMP1AQ9HD42 196 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 SPEGQ15772 3267 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 UBE2QL1A1L167 161 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 STATHP02808 62 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 IFNA4P05014 189 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 INHAP05111 366 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 EPXP11678 715 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 ST6GAL1P15907 406 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 BTF3P20290 206 aaKnown RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 ACRV1P26436 265 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 PBLDP30039 288 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 PTH2RP49190 550 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 RHOAP61586 193 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 NUDT18Q6ZVK8 323 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 CXXC5Q7LFL8 322 aaKnown RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 MRPL10Q7Z7H8 261 aaKnown RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 RFLNBQ8N5W9 214 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 SNX33Q8WV41 574 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 MYLIPQ8WY64 445 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF649Q9BS31 505 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 C20orf24Q9BUV8 137 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 BARX1Q9HBU1 254 aaPredicted RBP15.02□□□□□ -0.01
MCF2L-229ENST00000488765 NDOR1Q9UHB4 597 aa15.02□□□□□ -0.01
MCF2L-229ENST00000488765 ZSWIM8A7E2V4 1837 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 A0A1B0GUH1 482 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 RHOCP08134 193 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 TMIGD3P0DMS9 266 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-229ENST00000488765 NR2F1P10589 423 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 HOXC8P31273 242 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 TIA1P31483 386 aaKnown RBP eCLIP15.01□□□□□ -0.01
MCF2L-229ENST00000488765 RAB5BP61020 215 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF783Q6ZMS7 281 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 PDCD1LG2Q9BQ51 273 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF629Q9UEG4 869 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-229ENST00000488765 PRUNE2Q8WUY3 3088 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 GJB5O95377 273 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 H2AFB1P0C5Y9 115 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF44P15621 663 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 MPGP29372 298 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 PITPNAQ00169 270 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 PEA15Q15121 130 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 SSX9Q7RTT3 188 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 OR14A2Q96R54 314 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 CLCC1Q96S66 551 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 NRTNQ99748 197 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 GPN1Q9HCN4 374 aaPredicted RBP15.01□□□□□ -0.01
MCF2L-229ENST00000488765 MAN2C1Q9NTJ4 1040 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 ATG4BQ9Y4P1 393 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 SZT2Q5T011 3432 aa15.01□□□□□ -0.01
MCF2L-229ENST00000488765 A0A1W2PQ45 241 aaPredicted RBP15□□□□□ -0.01
MCF2L-229ENST00000488765 A0A1W2PQY0 241 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 CXorf65A6NEN9 183 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 CLN5O75503 358 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF14P17017 642 aaPredicted RBP15□□□□□ -0.01
MCF2L-229ENST00000488765 SLC11A1P49279 550 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 TP53I3Q53FA7 332 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ARL14Q8N4G2 192 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 EIF4E3Q8N5X7 224 aaKnown RBP15□□□□□ -0.01
MCF2L-229ENST00000488765 ACBD7Q8N6N7 88 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SMIM4Q8WVI0 70 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ACOT11Q8WXI4 607 aaPredicted RBP15□□□□□ -0.01
MCF2L-229ENST00000488765 PNPLA2Q96AD5 504 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 TMEM38AQ9H6F2 299 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SDHAF3Q9NRP4 125 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 RASL12Q9NYN1 266 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 A0A087WV48 116 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 F5H0A9 414 aaPredicted RBP15□□□□□ -0.01
MCF2L-229ENST00000488765 M0QZQ0 153 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SYT5O00445 386 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SMIM6P0DI80 62 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 DDX6P26196 483 aaKnown RBP eCLIP15□□□□□ -0.01
MCF2L-229ENST00000488765 DLX5P56178 289 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 TAS2R41P59536 307 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 CNTN1Q12860 1018 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 RNLSQ5VYX0 342 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ZNF626Q68DY1 528 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 TSSK4Q6SA08 328 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 LRRC70Q7Z2Q7 622 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 OTUB2Q96DC9 234 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SLC25A38Q96DW6 304 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 CAPNS2Q96L46 248 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SAMD8Q96LT4 415 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ISYNA1Q9NPH2 558 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 FBXO4Q9UKT5 387 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 SH2B3Q9UQQ2 575 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 EYSQ5T1H1 3165 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 ANKRD36A6QL64 1941 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 TMEM272A0A1B0GTI8 110 aa15□□□□□ -0.01
MCF2L-229ENST00000488765 GLOD5A6NK44 160 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms