RNA–Protein interactions for RNA: ENST00000487038.5

PDPN-205, Transcript of podoplanin, humanhuman

TSL 2 BASIC

Gene PDPN, Length 607 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-205ENST00000487038 BPIFB2Q8N4F0 458 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 ZNF614Q8N883 585 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 RFWD2Q8NHY2 731 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 GPR119Q8TDV5 335 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 UBASH3BQ8TF42 649 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 TMEM234Q8WY98 164 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 ST8SIA1Q92185 356 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 ARL5BQ96KC2 179 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 LRRC37BQ96QE4 947 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 MRPL46Q9H2W6 279 aaKnown RBP6.66□□□□□ -1.34
PDPN-205ENST00000487038 ANKZF1Q9H8Y5 726 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 DDX28Q9NUL7 540 aaKnown RBP6.66□□□□□ -1.34
PDPN-205ENST00000487038 PARPBPQ9NWS1 579 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 SLC9A8Q9Y2E8 581 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 CARD8Q9Y2G2 431 aa6.66□□□□□ -1.34
PDPN-205ENST00000487038 TRAV20A0A0B4J274 112 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF716A6NP11 495 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 A8MT66 165 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 hCG_2039718K7EN88 272 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 PPP6CO00743 305 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF264O43296 627 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 EIF4E2O60573 245 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 SLU7O95391 586 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 H6PDO95479 791 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ENO1P06733 434 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 UBL4AP11441 157 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 CHN1P15882 459 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 TAC1P20366 129 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 MPGP29372 298 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 GPR6P46095 362 aaPredicted RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 SLC16A1P53985 500 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 SLC25A3Q00325 362 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 IL1RL1Q01638 556 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 CAV1Q03135 178 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 RIN1Q13671 783 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 QPRTQ15274 297 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 TOMM34Q15785 309 aaPredicted RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 ADIPOQQ15848 244 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ADRM1Q16186 407 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 TIGD2Q4W5G0 525 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 CCNJQ5T5M9 372 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 C9orf135Q5VTT2 229 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 FAM71E1Q6IPT2 247 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 FAHD2BQ6P2I3 314 aaPredicted RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF551Q7Z340 670 aaPredicted RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZAR1Q86SH2 424 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 LRRC8AQ8IWT6 810 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 WDR31Q8NA23 367 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 SLC16A11Q8NCK7 471 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 NUP37Q8NFH4 326 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 OR4F15Q8NGB8 312 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 OR52E4Q8NGH9 312 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 OR5W2Q8NH69 310 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 FAM76AQ8TAV0 307 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 MRRFQ96E11 262 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 FAHD2AQ96GK7 314 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ANKRD27Q96NW4 1050 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 SLC38A2Q96QD8 506 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF382Q96SR6 550 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 STACQ99469 402 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 KLHDC3Q9BQ90 382 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 MRPL57Q9BQC6 102 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 BTBD2Q9BX70 525 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 DPH5Q9H2P9 285 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 CDC42EP4Q9H3Q1 356 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF442Q9H7R0 627 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZMAT3Q9HA38 289 aaKnown RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 NTN4Q9HB63 628 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 DUSP22Q9NRW4 184 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 ZNF225Q9UK10 706 aa6.65□□□□□ -1.34
PDPN-205ENST00000487038 POLR3HQ9Y535 204 aaPredicted RBP6.65□□□□□ -1.34
PDPN-205ENST00000487038 KMT2CQ8NEZ4 4911 aaKnown RBP6.64□□□□□ -1.35
PDPN-205ENST00000487038 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 IGHV1-18A0A0C4DH31 117 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 SERTM1A2A2V5 107 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 PDLIM1O00151 329 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 ETV2O00321 342 aaPredicted RBP6.64□□□□□ -1.35
PDPN-205ENST00000487038 ANKRD28O15084 1053 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 PMS2P2O95744 297 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 KRT16P08779 473 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 HKR1P10072 659 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 SAGP10523 405 aaPredicted RBP6.64□□□□□ -1.35
PDPN-205ENST00000487038 TFPIP10646 304 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 ANPEPP15144 967 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 NPR2P20594 1047 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 FKBP2P26885 142 aaKnown RBP6.64□□□□□ -1.35
PDPN-205ENST00000487038 PHBP35232 272 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 HSD17B3P37058 310 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 PAFAH1B1P43034 410 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 MAGEA4P43358 317 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 HTR6P50406 440 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 ATP12AP54707 1039 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 PKNOX1P55347 436 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 UBE2NP61088 152 aaKnown RBP6.64□□□□□ -1.35
PDPN-205ENST00000487038 MERTKQ12866 999 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 PRSS53Q2L4Q9 553 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 C3orf36Q3SXR2 165 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 REP15Q6BDI9 236 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 LRIG3Q6UXM1 1119 aa6.64□□□□□ -1.35
PDPN-205ENST00000487038 RBMS3Q6XE24 437 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms