RNA–Protein interactions for RNA: ENST00000486741.5

HMGN1-216, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 4,299 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-216ENST00000486741 OR4D11Q8NGI4 311 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 DIO2Q92813 273 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 UCKL1Q9NWZ5 548 aa12.26□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF726A6NNF4 738 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 SCG5P05408 212 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 NID1P14543 1247 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 CD1CP29017 333 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 FOXK2Q01167 660 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ACSM3Q53FZ2 586 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 DNAJA4Q8WW22 397 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PELOQ9BRX2 385 aaKnown RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 CRB3Q9BUF7 120 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PLEKHA1Q9HB21 404 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 FAM60AQ9NP50 221 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 SERINC1Q9NRX5 453 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 GRIP1Q9Y3R0 1128 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PATJQ8NI35 1801 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 SPTY2D1-AS1A0A0U1RR47 76 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 A0A1W2PPC4 97 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 A0A1W2PQF6 199 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 UBE2QL1A1L167 161 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ZSCAN5BA6NJL1 495 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 LAMTOR5O43504 91 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TRAPPC6AO75865 159 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TRHRP34981 398 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 SFTPDP35247 375 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 MAP2K3P46734 347 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 VASPP50552 380 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF41P51814 821 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ACTC1P68032 377 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ACTA1P68133 377 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 DUSP2Q05923 314 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF511Q8NB15 262 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 VWCEQ96DN2 955 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TP63Q9H3D4 680 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 UBE2ZQ9H832 354 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 UBQLN4Q9NRR5 601 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 RPH3AQ9Y2J0 694 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TEX13CA0A0J9YWL9 993 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ISPDA4D126 451 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 INMT-MINDY4F8WBC2 141 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 CTNSO60931 367 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 UBE2UQ5VVX9 321 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PAMR1Q6UXH9 720 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ZNF595Q8IYB9 648 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TSLPQ969D9 159 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 SLC35A3Q9Y2D2 325 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 ADAM18Q9Y3Q7 739 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 GABRPO00591 440 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PDCD5O14737 125 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 FFAR1O14842 300 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 DOK2O60496 412 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 DNAJB6O75190 326 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 RAB3BP20337 219 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 CD27P26842 260 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 KDM8Q8N371 416 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 DUSP19Q8WTR2 217 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 OR2A5Q96R48 311 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PITX2Q99697 317 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PHF7Q9BWX1 381 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 PRRG4Q9BZD6 226 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TESQ9UGI8 421 aaKnown RBP12.25□□□□□ -0.45
HMGN1-216ENST00000486741 KLK4Q9Y5K2 254 aa12.25□□□□□ -0.45
HMGN1-216ENST00000486741 TRIM3O75382 744 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 EFEMP2O95967 443 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 APEX1P27695 318 aaKnown RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SHC1P29353 583 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SOX18P35713 384 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 GDPGP1Q6ZNW5 385 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 NRARPQ7Z6K4 114 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 ATCAYQ86WG3 371 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 PHC2Q8IXK0 858 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 ALDH16A1Q8IZ83 802 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 CA13Q8N1Q1 262 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 OR6N1Q8NGY5 312 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 OR2AJ1Q8NGZ0 328 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 CTRCQ99895 268 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 PPP4R1LQ9P1A2 415 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 RASD1Q9Y272 281 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 CEP250Q9BV73 2442 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 A0A1W2PPL8 197 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SERTM1A2A2V5 107 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SERINC4A6NH21 518 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 METTL15A6NJ78 407 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 KCNK2O95069 426 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 FPR3P25089 353 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 EMP2P54851 167 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 RACK1P63244 317 aaKnown RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 C1orf94Q6P1W5 598 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SLC35F2Q8IXU6 374 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 UBQLNLQ8IYU4 475 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 RFT1Q96AA3 541 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 NARS2Q96I59 477 aaKnown RBP12.24□□□□□ -0.45
HMGN1-216ENST00000486741 PDCD10Q9BUL8 212 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 MROQ9BYG7 248 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 BCL2L10Q9HD36 194 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 SESN1Q9Y6P5 492 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 DRD5P21918 477 aa12.24□□□□□ -0.45
HMGN1-216ENST00000486741 NR4A2P43354 598 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms